Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 CR769767.2-201ENST00000622735 460 ntBASIC12.99□□□□□ -0.33
AP1S3Q96PC3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
AP1S3Q96PC3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 TRPA1-201ENST00000262209 5223 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 SLC25A1P2-201ENST00000430693 912 ntBASIC12.98□□□□□ -0.33
AP1S3Q96PC3 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.98□□□□□ -0.33
AP1S3Q96PC3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 TSPY17P-201ENST00000450329 467 ntBASIC12.98□□□□□ -0.33
AP1S3Q96PC3 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.98□□□□□ -0.33
AP1S3Q96PC3 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
AP1S3Q96PC3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
AP1S3Q96PC3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms