Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC46A1Q96NT5 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 AC140658.5-201ENST00000438532 169 ntBASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 SPDYE11-202ENST00000450699 704 ntBASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 INGX-202ENST00000489074 768 ntBASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 AC093214.1-201ENST00000511688 1107 ntBASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 KRT8P48-201ENST00000515599 1220 ntBASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 SPDYE9P-201ENST00000570642 692 ntBASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 SPDYE10P-202ENST00000612005 668 ntBASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 AL139327.4-201ENST00000612362 153 ntBASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 SPDYE8P-202ENST00000612377 668 ntBASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SLC46A1Q96NT5 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 CNN2P2-201ENST00000443536 909 ntBASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 CNN2P3-201ENST00000450201 906 ntBASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 AC069335.1-201ENST00000489972 472 ntBASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 AC099522.2-201ENST00000607001 744 ntBASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 AL136317.3-201ENST00000618497 906 ntBASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SLC46A1Q96NT5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms