Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC13.36□□□□□ -0.27
RAX2Q96IS3 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
RAX2Q96IS3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 AC108073.2-201ENST00000464002 357 ntBASIC13.35□□□□□ -0.27
RAX2Q96IS3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 AC139530.3-201ENST00000620344 690 ntBASIC13.35□□□□□ -0.27
RAX2Q96IS3 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
RAX2Q96IS3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
RAX2Q96IS3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAX2Q96IS3 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAX2Q96IS3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAX2Q96IS3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAX2Q96IS3 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAX2Q96IS3 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAX2Q96IS3 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAX2Q96IS3 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAX2Q96IS3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAX2Q96IS3 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAX2Q96IS3 MIR1233-2-201ENST00000408138 82 ntBASIC13.34□□□□□ -0.27
RAX2Q96IS3 MIR1233-1-201ENST00000408722 82 ntBASIC13.34□□□□□ -0.27
RAX2Q96IS3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAX2Q96IS3 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 MIR4751-201ENST00000578027 74 ntBASIC13.34□□□□□ -0.27
RAX2Q96IS3 AL353135.1-201ENST00000606729 504 ntBASIC13.34□□□□□ -0.27
RAX2Q96IS3 AC008667.4-201ENST00000607370 168 ntBASIC13.34□□□□□ -0.27
RAX2Q96IS3 AC064836.3-201ENST00000607928 673 ntBASIC13.34□□□□□ -0.27
RAX2Q96IS3 AL805961.1-202ENST00000641562 540 ntBASIC13.34□□□□□ -0.27
RAX2Q96IS3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
RAX2Q96IS3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAX2Q96IS3 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAX2Q96IS3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
RAX2Q96IS3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
RAX2Q96IS3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms