Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 FES-204ENST00000414248 2327 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHMP6Q96FZ7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 MMP23A-201ENST00000234610 1017 ntBASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 AC113404.2-201ENST00000507884 177 ntBASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 AL023803.3-201ENST00000615559 522 ntBASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.24■□□□□ 0.35
CHMP6Q96FZ7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 BLK-205ENST00000529894 2017 ntTSL 5 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 AC007663.1-201ENST00000438948 1240 ntBASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CHMP6Q96FZ7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms