Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
LRRC46Q96FV0 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 AC010460.3-201ENST00000511359 1579 ntBASIC15.46■□□□□ 0.07
LRRC46Q96FV0 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 CRYGEP-201ENST00000412192 528 ntBASIC15.46■□□□□ 0.07
LRRC46Q96FV0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 AL645608.8-201ENST00000606034 2086 ntBASIC15.46■□□□□ 0.07
LRRC46Q96FV0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
LRRC46Q96FV0 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
LRRC46Q96FV0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC46Q96FV0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC46Q96FV0 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC46Q96FV0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LRRC46Q96FV0 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 YBX2P1-201ENST00000394192 760 ntBASIC15.45■□□□□ 0.06
LRRC46Q96FV0 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 GPX1P2-201ENST00000429271 606 ntBASIC15.45■□□□□ 0.06
LRRC46Q96FV0 AC007967.2-201ENST00000432613 625 ntBASIC15.45■□□□□ 0.06
LRRC46Q96FV0 AC009947.1-201ENST00000444350 727 ntBASIC15.45■□□□□ 0.06
LRRC46Q96FV0 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LRRC46Q96FV0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC46Q96FV0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC46Q96FV0 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC46Q96FV0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRC46Q96FV0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC46Q96FV0 NKILA-202ENST00000614771 2598 ntBASIC15.44■□□□□ 0.06
LRRC46Q96FV0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC46Q96FV0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC15.44■□□□□ 0.06
LRRC46Q96FV0 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC46Q96FV0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC46Q96FV0 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC46Q96FV0 BX276092.7-203ENST00000637198 1536 ntBASIC15.44■□□□□ 0.06
LRRC46Q96FV0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC46Q96FV0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LRRC46Q96FV0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
LRRC46Q96FV0 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
LRRC46Q96FV0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.44■□□□□ 0.06
LRRC46Q96FV0 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms