Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SIPA1Q96FS4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
SIPA1Q96FS4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIPA1Q96FS4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.08■□□□□ 0.33
SIPA1Q96FS4 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SIPA1Q96FS4 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SIPA1Q96FS4 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC17.08■□□□□ 0.33
SIPA1Q96FS4 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 AC011467.4-201ENST00000594891 528 ntBASIC17.08■□□□□ 0.32
SIPA1Q96FS4 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
SIPA1Q96FS4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 AC005237.2-201ENST00000434368 219 ntBASIC17.07■□□□□ 0.32
SIPA1Q96FS4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 KRT8P48-201ENST00000515599 1220 ntBASIC17.07■□□□□ 0.32
SIPA1Q96FS4 AC109322.1-201ENST00000524499 1264 ntBASIC17.07■□□□□ 0.32
SIPA1Q96FS4 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 MIR3197-201ENST00000582241 73 ntBASIC17.07■□□□□ 0.32
SIPA1Q96FS4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SIPA1Q96FS4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 AC007613.1-201ENST00000572811 2597 ntBASIC17.06■□□□□ 0.32
SIPA1Q96FS4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SIPA1Q96FS4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms