Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 AC026471.1-201ENST00000564629 3026 ntBASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 LINC01451-201ENST00000623792 534 ntBASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.3■□□□□ 0.04
SNRNP40Q96DI7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 AP005018.1-201ENST00000525475 301 ntBASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 AC109635.5-201ENST00000533593 962 ntBASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 ALG1L8P-201ENST00000533887 760 ntBASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 GNAS-203ENST00000306120 1878 ntBASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.29■□□□□ 0.04
SNRNP40Q96DI7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 WASH6P-202ENST00000359512 1437 ntBASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.28■□□□□ 0.04
SNRNP40Q96DI7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 NEFHP1-201ENST00000412845 2629 ntBASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNRNP40Q96DI7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms