Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 AC034232.1-201ENST00000506026 1064 ntBASIC16.65■□□□□ 0.26
HIPK4Q8NE63 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 KRT89P-201ENST00000620027 1478 ntBASIC16.65■□□□□ 0.26
HIPK4Q8NE63 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.65■□□□□ 0.26
HIPK4Q8NE63 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
HIPK4Q8NE63 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
HIPK4Q8NE63 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.64■□□□□ 0.26
HIPK4Q8NE63 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 LINC01311-201ENST00000565162 1445 ntBASIC16.64■□□□□ 0.25
HIPK4Q8NE63 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 AC024563.2-201ENST00000603282 481 ntBASIC16.64■□□□□ 0.25
HIPK4Q8NE63 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 AC024909.3-201ENST00000611513 2257 ntBASIC16.64■□□□□ 0.25
HIPK4Q8NE63 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 KRT8P47-201ENST00000604727 1398 ntBASIC16.64■□□□□ 0.25
HIPK4Q8NE63 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
HIPK4Q8NE63 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.63■□□□□ 0.25
HIPK4Q8NE63 AC022188.1-201ENST00000620960 1664 ntBASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms