Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 MIR3687-2-201ENST00000577708 61 ntBASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 MIR3687-1-201ENST00000614492 61 ntBASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 AD001527.2-201ENST00000622994 785 ntBASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 AC046185.3-201ENST00000623228 1824 ntBASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC33Q8N5R6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 AC103564.2-201ENST00000432853 1299 ntBASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 AC073592.5-201ENST00000624854 528 ntBASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 AC005593.1-201ENST00000624894 515 ntBASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 AC079328.2-201ENST00000561241 3354 ntBASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC33Q8N5R6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 AC124067.4-201ENST00000519691 2379 ntBASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 STK25P1-201ENST00000585406 838 ntBASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 AC006557.2-201ENST00000592985 1240 ntBASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 AC148477.5-201ENST00000625164 1645 ntBASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 AL353593.2-201ENST00000602529 1483 ntBASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC33Q8N5R6 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CCDC33Q8N5R6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms