Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HERC6Q8IVU3 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 CR383656.12-201ENST00000549567 513 ntBASIC18.41■□□□□ 0.54
HERC6Q8IVU3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 AC027307.3-201ENST00000594262 1100 ntBASIC18.41■□□□□ 0.54
HERC6Q8IVU3 MIR6080-201ENST00000617359 66 ntBASIC18.41■□□□□ 0.54
HERC6Q8IVU3 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
HERC6Q8IVU3 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.4■□□□□ 0.54
HERC6Q8IVU3 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 AL009183.1-201ENST00000603760 355 ntBASIC18.4■□□□□ 0.54
HERC6Q8IVU3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 AP000997.3-201ENST00000623333 2250 ntBASIC18.4■□□□□ 0.54
HERC6Q8IVU3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HERC6Q8IVU3 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
HERC6Q8IVU3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
HERC6Q8IVU3 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.39■□□□□ 0.53
HERC6Q8IVU3 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC6Q8IVU3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC6Q8IVU3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC6Q8IVU3 OR8S1-201ENST00000310194 1080 ntBASIC18.39■□□□□ 0.53
HERC6Q8IVU3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HERC6Q8IVU3 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC18.39■□□□□ 0.53
HERC6Q8IVU3 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.39■□□□□ 0.53
HERC6Q8IVU3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.39■□□□□ 0.53
HERC6Q8IVU3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
HERC6Q8IVU3 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms