Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
LYSMD2Q8IV50 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.03■□□□□ -0
LYSMD2Q8IV50 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD2Q8IV50 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD2Q8IV50 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.02■□□□□ -0
LYSMD2Q8IV50 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.02■□□□□ -0
LYSMD2Q8IV50 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD2Q8IV50 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD2Q8IV50 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD2Q8IV50 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD2Q8IV50 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD2Q8IV50 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD2Q8IV50 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD2Q8IV50 AL391256.1-201ENST00000443260 1855 ntBASIC15.02■□□□□ -0
LYSMD2Q8IV50 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.02■□□□□ -0
LYSMD2Q8IV50 PPT1-215ENST00000641471 2368 ntBASIC15.02■□□□□ -0
LYSMD2Q8IV50 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD2Q8IV50 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
LYSMD2Q8IV50 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
LYSMD2Q8IV50 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
LYSMD2Q8IV50 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD2Q8IV50 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
LYSMD2Q8IV50 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.02■□□□□ -0
LYSMD2Q8IV50 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.02■□□□□ -0
LYSMD2Q8IV50 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC15.02■□□□□ -0
LYSMD2Q8IV50 AC116562.2-201ENST00000507042 360 ntBASIC15.02■□□□□ -0
LYSMD2Q8IV50 AC097488.1-201ENST00000507834 756 ntBASIC15.02■□□□□ -0
LYSMD2Q8IV50 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD2Q8IV50 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.02■□□□□ -0
LYSMD2Q8IV50 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC15.02■□□□□ -0
LYSMD2Q8IV50 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC15.02■□□□□ -0
LYSMD2Q8IV50 DGCR10-201ENST00000609839 495 ntBASIC15.02■□□□□ -0
LYSMD2Q8IV50 AL139327.4-201ENST00000612362 153 ntBASIC15.02■□□□□ -0
LYSMD2Q8IV50 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
LYSMD2Q8IV50 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 AL355802.2-201ENST00000402069 882 ntBASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 FAM197Y1-201ENST00000421178 764 ntBASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 SAPCD2P4-201ENST00000424595 1171 ntBASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 WWOX-216ENST00000569818 525 ntBASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 CR769767.2-201ENST00000622735 460 ntBASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 AC026748.1-201ENST00000624349 3251 ntBASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC15.01□□□□□ -0.01
LYSMD2Q8IV50 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms