Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 AP001269.4-201ENST00000609611 512 ntBASIC17.79■□□□□ 0.44
RFX6Q8HWS3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 SIGLEC16-201ENST00000599858 1437 ntBASIC17.79■□□□□ 0.44
RFX6Q8HWS3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RFX6Q8HWS3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 LINC00982-205ENST00000420957 435 ntBASIC17.78■□□□□ 0.44
RFX6Q8HWS3 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.78■□□□□ 0.44
RFX6Q8HWS3 AL732292.2-201ENST00000609649 430 ntBASIC17.78■□□□□ 0.44
RFX6Q8HWS3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 AP005117.1-201ENST00000584346 1413 ntBASIC17.78■□□□□ 0.44
RFX6Q8HWS3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 PCDHA14-201ENST00000506751 2298 ntBASIC17.78■□□□□ 0.44
RFX6Q8HWS3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RFX6Q8HWS3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 OS9-205ENST00000413095 1660 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 HCG4P8-203ENST00000443049 980 ntBASIC17.77■□□□□ 0.44
RFX6Q8HWS3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 BX005266.1-201ENST00000473402 457 ntBASIC17.77■□□□□ 0.44
RFX6Q8HWS3 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 MIR3652-201ENST00000579335 131 ntBASIC17.77■□□□□ 0.44
RFX6Q8HWS3 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
RFX6Q8HWS3 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX6Q8HWS3 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
RFX6Q8HWS3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RFX6Q8HWS3 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RFX6Q8HWS3 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.77■□□□□ 0.43
RFX6Q8HWS3 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RFX6Q8HWS3 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX6Q8HWS3 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX6Q8HWS3 AC078925.2-201ENST00000624013 1973 ntBASIC17.77■□□□□ 0.43
RFX6Q8HWS3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX6Q8HWS3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RFX6Q8HWS3 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 AC073592.4-201ENST00000623827 446 ntBASIC17.76■□□□□ 0.43
RFX6Q8HWS3 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RFX6Q8HWS3 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms