Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 EGFEM1P-202ENST00000431685 1563 ntBASIC18.99■□□□□ 0.63
TRIM50Q86XT4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 AL139400.1-201ENST00000366220 510 ntBASIC18.99■□□□□ 0.63
TRIM50Q86XT4 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 RFPL4AP1-201ENST00000530883 850 ntBASIC18.99■□□□□ 0.63
TRIM50Q86XT4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 AC022145.2-201ENST00000598203 171 ntBASIC18.99■□□□□ 0.63
TRIM50Q86XT4 AC093028.1-201ENST00000622998 982 ntBASIC18.99■□□□□ 0.63
TRIM50Q86XT4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM50Q86XT4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.98■□□□□ 0.63
TRIM50Q86XT4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 AC112191.1-201ENST00000523689 701 ntBASIC18.98■□□□□ 0.63
TRIM50Q86XT4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM50Q86XT4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 TSEN15P1-201ENST00000423257 515 ntBASIC18.97■□□□□ 0.63
TRIM50Q86XT4 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 CYMP-203ENST00000474680 1263 ntBASIC18.97■□□□□ 0.63
TRIM50Q86XT4 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 AC106028.4-201ENST00000614509 607 ntBASIC18.97■□□□□ 0.63
TRIM50Q86XT4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 FZD10-202ENST00000539839 3282 ntBASIC18.97■□□□□ 0.63
TRIM50Q86XT4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM50Q86XT4 AC093525.9-201ENST00000624961 1746 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms