Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.21□□□□□ -0.13
CSMD2Q7Z408 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CSMD2Q7Z408 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
CSMD2Q7Z408 AC234783.1-201ENST00000441761 496 ntBASIC14.21□□□□□ -0.14
CSMD2Q7Z408 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
CSMD2Q7Z408 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.21□□□□□ -0.14
CSMD2Q7Z408 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC14.21□□□□□ -0.14
CSMD2Q7Z408 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
CSMD2Q7Z408 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 AC011495.1-201ENST00000498085 584 ntBASIC14.2□□□□□ -0.14
CSMD2Q7Z408 MIR6727-201ENST00000620702 65 ntBASIC14.2□□□□□ -0.14
CSMD2Q7Z408 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 AC093503.3-201ENST00000624917 2352 ntBASIC14.2□□□□□ -0.14
CSMD2Q7Z408 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 AC002558.1-201ENST00000488906 803 ntBASIC14.2□□□□□ -0.14
CSMD2Q7Z408 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.2□□□□□ -0.14
CSMD2Q7Z408 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 RN7SL190P-201ENST00000582519 257 ntBASIC14.19□□□□□ -0.14
CSMD2Q7Z408 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 AC018665.1-201ENST00000622927 1362 ntBASIC14.19□□□□□ -0.14
CSMD2Q7Z408 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CSMD2Q7Z408 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 IGHV3-52-201ENST00000519770 353 ntBASIC14.18□□□□□ -0.14
CSMD2Q7Z408 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CSMD2Q7Z408 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.18□□□□□ -0.14
CSMD2Q7Z408 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms