Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 AC005034.1-201ENST00000426657 489 ntBASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 AC069335.1-201ENST00000489972 472 ntBASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 AC079140.1-201ENST00000508039 487 ntBASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 AF228730.6-201ENST00000641497 218 ntBASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 AC084121.3-201ENST00000641716 218 ntBASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 AC105233.6-201ENST00000642093 218 ntBASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC149Q6ZUS6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 AC135050.7-201ENST00000624508 2218 ntBASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 HMGA1P7-201ENST00000406908 502 ntBASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 AC055876.3-201ENST00000431496 288 ntBASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 TERF1P3-201ENST00000505638 1227 ntBASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 AC087641.1-201ENST00000557561 1021 ntBASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 AC051619.7-201ENST00000568314 623 ntBASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 AC138649.4-201ENST00000612222 287 ntBASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 AL353732.1-201ENST00000569618 1459 ntBASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC149Q6ZUS6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 OR6D1P-202ENST00000641007 5290 ntBASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 HCG4-201ENST00000418983 998 ntBASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 AL512356.2-201ENST00000546955 174 ntBASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 AL135744.1-201ENST00000565098 629 ntBASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 AL035252.4-201ENST00000624174 288 ntBASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC149Q6ZUS6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC149Q6ZUS6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms