Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 RBM17P3-201ENST00000417687 1192 ntBASIC19.24■□□□□ 0.67
SHC4Q6S5L8 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 MTDHP3-201ENST00000594186 672 ntBASIC19.24■□□□□ 0.67
SHC4Q6S5L8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 LINC00895-201ENST00000629028 1637 ntBASIC19.24■□□□□ 0.67
SHC4Q6S5L8 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SHC4Q6S5L8 AL356309.3-201ENST00000624132 1934 ntBASIC19.23■□□□□ 0.67
SHC4Q6S5L8 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 NABP1-203ENST00000409510 843 ntTSL 5 BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 HCG4P8-203ENST00000443049 980 ntBASIC19.23■□□□□ 0.67
SHC4Q6S5L8 KRT18P31-201ENST00000506277 1292 ntBASIC19.23■□□□□ 0.67
SHC4Q6S5L8 AP002490.2-201ENST00000524791 560 ntBASIC19.23■□□□□ 0.67
SHC4Q6S5L8 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 AL139288.1-201ENST00000623748 933 ntBASIC19.23■□□□□ 0.67
SHC4Q6S5L8 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 NCF1C-201ENST00000438382 1427 ntBASIC19.23■□□□□ 0.67
SHC4Q6S5L8 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC19.23■□□□□ 0.67
SHC4Q6S5L8 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 ALOX12P2-203ENST00000570921 1945 ntBASIC19.22■□□□□ 0.67
SHC4Q6S5L8 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 TSPY19P-201ENST00000418461 509 ntBASIC19.22■□□□□ 0.67
SHC4Q6S5L8 TSPY18P-201ENST00000441642 509 ntBASIC19.22■□□□□ 0.67
SHC4Q6S5L8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 FGFR3P6-201ENST00000457012 610 ntBASIC19.22■□□□□ 0.67
SHC4Q6S5L8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 SART3-203ENST00000546611 1184 ntBASIC19.22■□□□□ 0.67
SHC4Q6S5L8 MIR3652-201ENST00000579335 131 ntBASIC19.22■□□□□ 0.67
SHC4Q6S5L8 AL355877.3-201ENST00000622820 899 ntBASIC19.22■□□□□ 0.67
SHC4Q6S5L8 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 KRT8P49-201ENST00000604166 1432 ntBASIC19.22■□□□□ 0.67
SHC4Q6S5L8 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHC4Q6S5L8 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHC4Q6S5L8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms