Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.95■□□□□ 0.46
RNF43Q68DV7 KRT18P3-201ENST00000451602 1288 ntBASIC17.95■□□□□ 0.46
RNF43Q68DV7 AC112482.1-201ENST00000492080 688 ntBASIC17.95■□□□□ 0.46
RNF43Q68DV7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF43Q68DV7 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF43Q68DV7 AC105339.3-201ENST00000560043 636 ntBASIC17.95■□□□□ 0.46
RNF43Q68DV7 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF43Q68DV7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF43Q68DV7 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
RNF43Q68DV7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF43Q68DV7 AL355312.1-201ENST00000407115 2176 ntBASIC17.95■□□□□ 0.46
RNF43Q68DV7 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF43Q68DV7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF43Q68DV7 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF43Q68DV7 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF43Q68DV7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF43Q68DV7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF43Q68DV7 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.95■□□□□ 0.46
RNF43Q68DV7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF43Q68DV7 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF43Q68DV7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF43Q68DV7 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF43Q68DV7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.95■□□□□ 0.46
RNF43Q68DV7 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RNF43Q68DV7 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.95■□□□□ 0.46
RNF43Q68DV7 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.95■□□□□ 0.46
RNF43Q68DV7 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF43Q68DV7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RNF43Q68DV7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF43Q68DV7 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RNF43Q68DV7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
RNF43Q68DV7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
RNF43Q68DV7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF43Q68DV7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF43Q68DV7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF43Q68DV7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF43Q68DV7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF43Q68DV7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF43Q68DV7 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF43Q68DV7 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
RNF43Q68DV7 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF43Q68DV7 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF43Q68DV7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF43Q68DV7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF43Q68DV7 IGHV3-52-201ENST00000519770 353 ntBASIC17.94■□□□□ 0.46
RNF43Q68DV7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.94■□□□□ 0.46
RNF43Q68DV7 AC040169.1-201ENST00000565382 521 ntBASIC17.94■□□□□ 0.46
RNF43Q68DV7 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF43Q68DV7 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF43Q68DV7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.94■□□□□ 0.46
RNF43Q68DV7 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF43Q68DV7 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF43Q68DV7 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF43Q68DV7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
RNF43Q68DV7 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RNF43Q68DV7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF43Q68DV7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RNF43Q68DV7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.94■□□□□ 0.46
RNF43Q68DV7 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 SIGLEC30P-201ENST00000455569 941 ntBASIC17.93■□□□□ 0.46
RNF43Q68DV7 AC092910.1-201ENST00000482027 1129 ntBASIC17.93■□□□□ 0.46
RNF43Q68DV7 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 AC034105.1-201ENST00000563488 319 ntBASIC17.93■□□□□ 0.46
RNF43Q68DV7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 AC004706.3-202ENST00000621574 984 ntBASIC17.93■□□□□ 0.46
RNF43Q68DV7 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 AL162727.3-201ENST00000635661 2787 ntBASIC17.93■□□□□ 0.46
RNF43Q68DV7 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.93■□□□□ 0.46
RNF43Q68DV7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RNF43Q68DV7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RNF43Q68DV7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.92■□□□□ 0.46
RNF43Q68DV7 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms