Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 AL732292.2-201ENST00000609649 430 ntBASIC16.31■□□□□ 0.2
SPIN4Q56A73 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.31■□□□□ 0.2
SPIN4Q56A73 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPIN4Q56A73 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SPIN4Q56A73 PCDHB17P-201ENST00000539533 2393 ntBASIC16.3■□□□□ 0.2
SPIN4Q56A73 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.3■□□□□ 0.2
SPIN4Q56A73 PCDHA14-201ENST00000506751 2298 ntBASIC16.3■□□□□ 0.2
SPIN4Q56A73 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.3■□□□□ 0.2
SPIN4Q56A73 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SPIN4Q56A73 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SPIN4Q56A73 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SPIN4Q56A73 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.3■□□□□ 0.2
SPIN4Q56A73 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 KRT18P31-201ENST00000506277 1292 ntBASIC16.3■□□□□ 0.2
SPIN4Q56A73 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.3■□□□□ 0.2
SPIN4Q56A73 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.3■□□□□ 0.2
SPIN4Q56A73 NKAPP1-205ENST00000585790 367 ntBASIC16.3■□□□□ 0.2
SPIN4Q56A73 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.3■□□□□ 0.2
SPIN4Q56A73 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.3■□□□□ 0.2
SPIN4Q56A73 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SPIN4Q56A73 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.3■□□□□ 0.2
SPIN4Q56A73 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.3■□□□□ 0.2
SPIN4Q56A73 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.3■□□□□ 0.2
SPIN4Q56A73 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SPIN4Q56A73 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.29■□□□□ 0.2
SPIN4Q56A73 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.29■□□□□ 0.2
SPIN4Q56A73 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SPIN4Q56A73 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.29■□□□□ 0.2
SPIN4Q56A73 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 AL590787.1-201ENST00000568856 1315 ntBASIC16.29■□□□□ 0.2
SPIN4Q56A73 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.29■□□□□ 0.2
SPIN4Q56A73 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.29■□□□□ 0.2
SPIN4Q56A73 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.29■□□□□ 0.2
SPIN4Q56A73 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.29■□□□□ 0.2
SPIN4Q56A73 PRELID1P1-202ENST00000567272 903 ntBASIC16.29■□□□□ 0.2
SPIN4Q56A73 MTDHP3-201ENST00000594186 672 ntBASIC16.29■□□□□ 0.2
SPIN4Q56A73 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 AL589182.2-201ENST00000619332 1049 ntBASIC16.29■□□□□ 0.2
SPIN4Q56A73 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.29■□□□□ 0.2
SPIN4Q56A73 AL355877.3-201ENST00000622820 899 ntBASIC16.29■□□□□ 0.2
SPIN4Q56A73 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SPIN4Q56A73 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
SPIN4Q56A73 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.29■□□□□ 0.2
SPIN4Q56A73 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SPIN4Q56A73 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.29■□□□□ 0.2
SPIN4Q56A73 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.29■□□□□ 0.2
SPIN4Q56A73 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SPIN4Q56A73 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms