Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 AL592309.1-201ENST00000443127 649 ntBASIC20.32■□□□□ 0.84
PDS5AQ29RF7 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 LSM12-202ENST00000585388 942 ntTSL 3 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 AC021097.1-201ENST00000607902 574 ntBASIC20.32■□□□□ 0.84
PDS5AQ29RF7 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.32■□□□□ 0.84
PDS5AQ29RF7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.32■□□□□ 0.84
PDS5AQ29RF7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.31■□□□□ 0.84
PDS5AQ29RF7 HMGN1P19-201ENST00000436976 333 ntBASIC20.31■□□□□ 0.84
PDS5AQ29RF7 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 AC093028.1-201ENST00000622998 982 ntBASIC20.31■□□□□ 0.84
PDS5AQ29RF7 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 AC092053.1-201ENST00000605787 1936 ntBASIC20.31■□□□□ 0.84
PDS5AQ29RF7 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC20.31■□□□□ 0.84
PDS5AQ29RF7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 AC109322.1-201ENST00000524499 1264 ntBASIC20.3■□□□□ 0.84
PDS5AQ29RF7 AL512356.2-201ENST00000546955 174 ntBASIC20.3■□□□□ 0.84
PDS5AQ29RF7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 ORC5-208ENST00000626700 344 ntTSL 3 BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.3■□□□□ 0.84
PDS5AQ29RF7 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 GPS2P2-201ENST00000430745 888 ntBASIC20.29■□□□□ 0.84
PDS5AQ29RF7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDS5AQ29RF7 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms