Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
HIST1H1AQ02539 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.15□□□□□ -0.31
HIST1H1AQ02539 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 TMPOP1-202ENST00000424642 1267 ntBASIC13.14□□□□□ -0.31
HIST1H1AQ02539 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.14□□□□□ -0.31
HIST1H1AQ02539 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 DUX4L26-201ENST00000489078 1255 ntBASIC13.14□□□□□ -0.31
HIST1H1AQ02539 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.14□□□□□ -0.31
HIST1H1AQ02539 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 TSPY22P-201ENST00000427496 604 ntBASIC13.13□□□□□ -0.31
HIST1H1AQ02539 AC005104.2-201ENST00000427818 678 ntBASIC13.13□□□□□ -0.31
HIST1H1AQ02539 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 PCDHB17P-201ENST00000539533 2393 ntBASIC13.13□□□□□ -0.31
HIST1H1AQ02539 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HIST1H1AQ02539 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.12□□□□□ -0.31
HIST1H1AQ02539 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HIST1H1AQ02539 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H1AQ02539 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.12□□□□□ -0.31
HIST1H1AQ02539 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms