Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S1P61966 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S1P61966 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.16■□□□□ 0.34
AP1S1P61966 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
AP1S1P61966 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S1P61966 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
AP1S1P61966 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S1P61966 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S1P61966 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.16■□□□□ 0.34
AP1S1P61966 MIR574-201ENST00000385209 96 ntBASIC17.16■□□□□ 0.34
AP1S1P61966 IGLL3P-201ENST00000412472 434 ntBASIC17.16■□□□□ 0.34
AP1S1P61966 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC17.16■□□□□ 0.34
AP1S1P61966 AC007967.2-201ENST00000432613 625 ntBASIC17.16■□□□□ 0.34
AP1S1P61966 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.16■□□□□ 0.34
AP1S1P61966 FAM185BP-201ENST00000443595 716 ntBASIC17.16■□□□□ 0.34
AP1S1P61966 CXCL1P1-201ENST00000502804 216 ntBASIC17.16■□□□□ 0.34
AP1S1P61966 RNA5SP416-201ENST00000516838 111 ntBASIC17.16■□□□□ 0.34
AP1S1P61966 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.16■□□□□ 0.34
AP1S1P61966 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.16■□□□□ 0.34
AP1S1P61966 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.16■□□□□ 0.34
AP1S1P61966 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S1P61966 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
AP1S1P61966 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.16■□□□□ 0.34
AP1S1P61966 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.16■□□□□ 0.34
AP1S1P61966 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP1S1P61966 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.16■□□□□ 0.34
AP1S1P61966 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
AP1S1P61966 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.15■□□□□ 0.34
AP1S1P61966 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.15■□□□□ 0.34
AP1S1P61966 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
AP1S1P61966 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC17.15■□□□□ 0.34
AP1S1P61966 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.15■□□□□ 0.34
AP1S1P61966 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 KRT18P3-201ENST00000451602 1288 ntBASIC17.15■□□□□ 0.34
AP1S1P61966 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.15■□□□□ 0.34
AP1S1P61966 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.15■□□□□ 0.34
AP1S1P61966 AC096734.2-201ENST00000562054 433 ntBASIC17.15■□□□□ 0.34
AP1S1P61966 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
AP1S1P61966 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.15■□□□□ 0.34
AP1S1P61966 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC17.15■□□□□ 0.34
AP1S1P61966 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
AP1S1P61966 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.15■□□□□ 0.34
AP1S1P61966 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP1S1P61966 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
AP1S1P61966 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.14■□□□□ 0.34
AP1S1P61966 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.14■□□□□ 0.33
AP1S1P61966 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
AP1S1P61966 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S1P61966 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
AP1S1P61966 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S1P61966 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S1P61966 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S1P61966 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S1P61966 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
AP1S1P61966 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
AP1S1P61966 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S1P61966 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.14■□□□□ 0.33
AP1S1P61966 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.14■□□□□ 0.33
AP1S1P61966 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S1P61966 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
AP1S1P61966 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.14■□□□□ 0.33
AP1S1P61966 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.14■□□□□ 0.33
AP1S1P61966 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S1P61966 AC091167.2-201ENST00000579581 588 ntBASIC17.14■□□□□ 0.33
AP1S1P61966 AC005412.3-201ENST00000580309 715 ntBASIC17.14■□□□□ 0.33
AP1S1P61966 AC010507.1-201ENST00000633895 436 ntBASIC17.14■□□□□ 0.33
AP1S1P61966 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S1P61966 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
AP1S1P61966 AC060834.1-201ENST00000443027 2032 ntBASIC17.14■□□□□ 0.33
AP1S1P61966 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S1P61966 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.14■□□□□ 0.33
AP1S1P61966 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
AP1S1P61966 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP1S1P61966 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
AP1S1P61966 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.13■□□□□ 0.33
AP1S1P61966 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
AP1S1P61966 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP1S1P61966 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms