Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC15.6■□□□□ 0.09
CXCR4P61073 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.6■□□□□ 0.09
CXCR4P61073 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
CXCR4P61073 AL138966.2-201ENST00000621997 464 ntBASIC15.6■□□□□ 0.09
CXCR4P61073 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CXCR4P61073 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.6■□□□□ 0.09
CXCR4P61073 AC097374.2-201ENST00000618617 1306 ntBASIC15.6■□□□□ 0.09
CXCR4P61073 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.6■□□□□ 0.09
CXCR4P61073 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
CXCR4P61073 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.6■□□□□ 0.09
CXCR4P61073 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC15.6■□□□□ 0.09
CXCR4P61073 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.6■□□□□ 0.09
CXCR4P61073 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CXCR4P61073 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC15.59■□□□□ 0.09
CXCR4P61073 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.59■□□□□ 0.09
CXCR4P61073 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.59■□□□□ 0.09
CXCR4P61073 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.59■□□□□ 0.09
CXCR4P61073 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.59■□□□□ 0.09
CXCR4P61073 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.59■□□□□ 0.09
CXCR4P61073 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CXCR4P61073 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC15.59■□□□□ 0.09
CXCR4P61073 AC140113.3-201ENST00000605663 199 ntBASIC15.59■□□□□ 0.09
CXCR4P61073 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
CXCR4P61073 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.59■□□□□ 0.09
CXCR4P61073 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.59■□□□□ 0.09
CXCR4P61073 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CXCR4P61073 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 TUBB8P12-201ENST00000308911 1335 ntBASIC15.59■□□□□ 0.09
CXCR4P61073 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 TUBB7P-202ENST00000428444 1305 ntBASIC15.59■□□□□ 0.09
CXCR4P61073 TUBB8P7-204ENST00000567960 1332 ntBASIC15.59■□□□□ 0.09
CXCR4P61073 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
CXCR4P61073 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.59■□□□□ 0.09
CXCR4P61073 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CXCR4P61073 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CXCR4P61073 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CXCR4P61073 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CXCR4P61073 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.59■□□□□ 0.09
CXCR4P61073 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC15.59■□□□□ 0.09
CXCR4P61073 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CXCR4P61073 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CXCR4P61073 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.58■□□□□ 0.09
CXCR4P61073 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
CXCR4P61073 AC023824.1-201ENST00000562945 2975 ntBASIC15.58■□□□□ 0.09
CXCR4P61073 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
CXCR4P61073 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CXCR4P61073 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.58■□□□□ 0.08
CXCR4P61073 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
CXCR4P61073 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.58■□□□□ 0.08
CXCR4P61073 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CXCR4P61073 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CXCR4P61073 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CXCR4P61073 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CXCR4P61073 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CXCR4P61073 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CXCR4P61073 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.58■□□□□ 0.08
CXCR4P61073 HLA-J-202ENST00000469281 1241 ntBASIC15.58■□□□□ 0.08
CXCR4P61073 IGHV3-52-201ENST00000519770 353 ntBASIC15.58■□□□□ 0.08
CXCR4P61073 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.58■□□□□ 0.08
CXCR4P61073 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.58■□□□□ 0.08
CXCR4P61073 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
CXCR4P61073 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CXCR4P61073 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.58■□□□□ 0.08
CXCR4P61073 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CXCR4P61073 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CXCR4P61073 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CXCR4P61073 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.58■□□□□ 0.08
CXCR4P61073 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CXCR4P61073 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CXCR4P61073 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
CXCR4P61073 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms