Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC20.03■□□□□ 0.8
RHBDL3P58872 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
RHBDL3P58872 AC069262.1-201ENST00000539058 672 ntBASIC20.03■□□□□ 0.8
RHBDL3P58872 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC20.03■□□□□ 0.8
RHBDL3P58872 DUX4L27-201ENST00000554796 1261 ntBASIC20.03■□□□□ 0.8
RHBDL3P58872 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC20.03■□□□□ 0.8
RHBDL3P58872 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RHBDL3P58872 AP001350.2-201ENST00000625104 1094 ntBASIC20.03■□□□□ 0.8
RHBDL3P58872 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.03■□□□□ 0.8
RHBDL3P58872 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RHBDL3P58872 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RHBDL3P58872 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RHBDL3P58872 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RHBDL3P58872 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RHBDL3P58872 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RHBDL3P58872 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RHBDL3P58872 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RHBDL3P58872 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RHBDL3P58872 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RHBDL3P58872 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RHBDL3P58872 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RHBDL3P58872 SLC9A3P2-201ENST00000447821 2021 ntBASIC20.02■□□□□ 0.8
RHBDL3P58872 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RHBDL3P58872 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RHBDL3P58872 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RHBDL3P58872 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.02■□□□□ 0.8
RHBDL3P58872 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.02■□□□□ 0.8
RHBDL3P58872 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC20.02■□□□□ 0.8
RHBDL3P58872 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RHBDL3P58872 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC20.02■□□□□ 0.8
RHBDL3P58872 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC20.02■□□□□ 0.8
RHBDL3P58872 FAM86GP-201ENST00000448322 971 ntBASIC20.02■□□□□ 0.8
RHBDL3P58872 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.02■□□□□ 0.8
RHBDL3P58872 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC20.02■□□□□ 0.8
RHBDL3P58872 SLC25A39P2-201ENST00000537614 270 ntBASIC20.02■□□□□ 0.8
RHBDL3P58872 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.02■□□□□ 0.8
RHBDL3P58872 AL138918.1-201ENST00000568306 659 ntBASIC20.02■□□□□ 0.8
RHBDL3P58872 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC20.02■□□□□ 0.8
RHBDL3P58872 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RHBDL3P58872 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RHBDL3P58872 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
RHBDL3P58872 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.02■□□□□ 0.8
RHBDL3P58872 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RHBDL3P58872 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
RHBDL3P58872 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
RHBDL3P58872 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
RHBDL3P58872 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
RHBDL3P58872 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
RHBDL3P58872 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
RHBDL3P58872 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.02■□□□□ 0.79
RHBDL3P58872 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RHBDL3P58872 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RHBDL3P58872 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
RHBDL3P58872 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
RHBDL3P58872 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC20.02■□□□□ 0.79
RHBDL3P58872 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RHBDL3P58872 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC20.02■□□□□ 0.79
RHBDL3P58872 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RHBDL3P58872 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RHBDL3P58872 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
RHBDL3P58872 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.01■□□□□ 0.79
RHBDL3P58872 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
RHBDL3P58872 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RHBDL3P58872 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RHBDL3P58872 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RHBDL3P58872 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC20.01■□□□□ 0.79
RHBDL3P58872 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RHBDL3P58872 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
RHBDL3P58872 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RHBDL3P58872 FAM8A3P-201ENST00000427218 844 ntBASIC20.01■□□□□ 0.79
RHBDL3P58872 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC20.01■□□□□ 0.79
RHBDL3P58872 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RHBDL3P58872 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC20.01■□□□□ 0.79
RHBDL3P58872 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RHBDL3P58872 IGHV3-62-201ENST00000520057 340 ntBASIC20.01■□□□□ 0.79
RHBDL3P58872 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.01■□□□□ 0.79
RHBDL3P58872 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RHBDL3P58872 AC026150.2-201ENST00000564693 1156 ntBASIC20.01■□□□□ 0.79
RHBDL3P58872 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RHBDL3P58872 AP000842.3-202ENST00000569238 1080 ntBASIC20.01■□□□□ 0.79
RHBDL3P58872 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC20.01■□□□□ 0.79
RHBDL3P58872 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RHBDL3P58872 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC20.01■□□□□ 0.79
RHBDL3P58872 AC008267.7-201ENST00000624570 1194 ntBASIC20.01■□□□□ 0.79
RHBDL3P58872 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC20.01■□□□□ 0.79
RHBDL3P58872 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
RHBDL3P58872 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RHBDL3P58872 UXT-AS1-201ENST00000590504 1525 ntBASIC20.01■□□□□ 0.79
RHBDL3P58872 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
RHBDL3P58872 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RHBDL3P58872 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20■□□□□ 0.79
RHBDL3P58872 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20■□□□□ 0.79
RHBDL3P58872 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RHBDL3P58872 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms