Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3P56703 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
WNT3P56703 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
WNT3P56703 TUBB8P12-201ENST00000308911 1335 ntBASIC16.16■□□□□ 0.18
WNT3P56703 TUBB7P-202ENST00000428444 1305 ntBASIC16.16■□□□□ 0.18
WNT3P56703 TUBB8P7-204ENST00000567960 1332 ntBASIC16.16■□□□□ 0.18
WNT3P56703 AC079776.2-201ENST00000641154 1609 ntBASIC16.16■□□□□ 0.18
WNT3P56703 PCDH8P1-201ENST00000428983 2773 ntBASIC16.15■□□□□ 0.18
WNT3P56703 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 AC006449.5-201ENST00000610658 2098 ntBASIC16.15■□□□□ 0.18
WNT3P56703 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.15■□□□□ 0.18
WNT3P56703 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.15■□□□□ 0.18
WNT3P56703 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 AKR1C7P-201ENST00000305623 895 ntBASIC16.15■□□□□ 0.18
WNT3P56703 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.15■□□□□ 0.18
WNT3P56703 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 AP002414.1-201ENST00000391405 1147 ntBASIC16.15■□□□□ 0.18
WNT3P56703 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
WNT3P56703 LINC00982-205ENST00000420957 435 ntBASIC16.15■□□□□ 0.18
WNT3P56703 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.15■□□□□ 0.18
WNT3P56703 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.15■□□□□ 0.18
WNT3P56703 FAAHP1-202ENST00000446499 1238 ntBASIC16.15■□□□□ 0.18
WNT3P56703 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.15■□□□□ 0.18
WNT3P56703 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.15■□□□□ 0.18
WNT3P56703 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.15■□□□□ 0.18
WNT3P56703 LINC01711-201ENST00000598340 967 ntBASIC16.15■□□□□ 0.18
WNT3P56703 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.15■□□□□ 0.18
WNT3P56703 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
WNT3P56703 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
WNT3P56703 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.15■□□□□ 0.18
WNT3P56703 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.15■□□□□ 0.18
WNT3P56703 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
WNT3P56703 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
WNT3P56703 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.18
WNT3P56703 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.14■□□□□ 0.17
WNT3P56703 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
WNT3P56703 OR6D1P-202ENST00000641007 5290 ntBASIC16.14■□□□□ 0.17
WNT3P56703 AL391256.1-201ENST00000443260 1855 ntBASIC16.14■□□□□ 0.17
WNT3P56703 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
WNT3P56703 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
WNT3P56703 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.14■□□□□ 0.17
WNT3P56703 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.14■□□□□ 0.17
WNT3P56703 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.14■□□□□ 0.17
WNT3P56703 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.14■□□□□ 0.17
WNT3P56703 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.14■□□□□ 0.17
WNT3P56703 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.14■□□□□ 0.17
WNT3P56703 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.14■□□□□ 0.17
WNT3P56703 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.14■□□□□ 0.17
WNT3P56703 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
WNT3P56703 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.14■□□□□ 0.17
WNT3P56703 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.14■□□□□ 0.17
WNT3P56703 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
WNT3P56703 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
WNT3P56703 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.14■□□□□ 0.17
WNT3P56703 AC104692.2-201ENST00000603054 253 ntBASIC16.14■□□□□ 0.17
WNT3P56703 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.14■□□□□ 0.17
WNT3P56703 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.14■□□□□ 0.17
WNT3P56703 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.14■□□□□ 0.17
WNT3P56703 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.14■□□□□ 0.17
WNT3P56703 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
WNT3P56703 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
WNT3P56703 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
WNT3P56703 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
WNT3P56703 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
WNT3P56703 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms