Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
APOC4P55056 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.51□□□□□ -0.41
APOC4P55056 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
APOC4P55056 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC12.51□□□□□ -0.41
APOC4P55056 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC12.51□□□□□ -0.41
APOC4P55056 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
APOC4P55056 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC4P55056 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
APOC4P55056 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
APOC4P55056 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC4P55056 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC4P55056 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
APOC4P55056 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
APOC4P55056 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
APOC4P55056 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
APOC4P55056 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
APOC4P55056 IGLL3P-201ENST00000412472 434 ntBASIC12.5□□□□□ -0.41
APOC4P55056 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC4P55056 RHOQP3-201ENST00000437982 621 ntBASIC12.5□□□□□ -0.41
APOC4P55056 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.5□□□□□ -0.41
APOC4P55056 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC4P55056 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.5□□□□□ -0.41
APOC4P55056 POLD4-207ENST00000531239 584 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC4P55056 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC12.5□□□□□ -0.41
APOC4P55056 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.5□□□□□ -0.41
APOC4P55056 AC005829.1-201ENST00000570002 483 ntBASIC12.5□□□□□ -0.41
APOC4P55056 AQP6-205ENST00000618286 829 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC4P55056 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC4P55056 EGFEM1P-202ENST00000431685 1563 ntBASIC12.5□□□□□ -0.41
APOC4P55056 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC4P55056 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
APOC4P55056 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
APOC4P55056 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC12.5□□□□□ -0.41
APOC4P55056 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC4P55056 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC4P55056 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
APOC4P55056 NEFHP1-201ENST00000412845 2629 ntBASIC12.5□□□□□ -0.41
APOC4P55056 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC12.5□□□□□ -0.41
APOC4P55056 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC4P55056 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC12.49□□□□□ -0.41
APOC4P55056 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
APOC4P55056 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
APOC4P55056 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC4P55056 PC-214ENST00000628663 1470 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC4P55056 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC4P55056 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.49□□□□□ -0.41
APOC4P55056 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC4P55056 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 RPSAP43-201ENST00000402237 625 ntBASIC12.49□□□□□ -0.41
APOC4P55056 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.49□□□□□ -0.41
APOC4P55056 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC4P55056 MKNK2P1-201ENST00000437526 628 ntBASIC12.49□□□□□ -0.41
APOC4P55056 FAM185BP-201ENST00000443595 716 ntBASIC12.49□□□□□ -0.41
APOC4P55056 AC074386.1-202ENST00000463561 864 ntBASIC12.49□□□□□ -0.41
APOC4P55056 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC4P55056 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC4P55056 KRT19P2-202ENST00000557173 1012 ntBASIC12.49□□□□□ -0.41
APOC4P55056 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
APOC4P55056 CYB561-216ENST00000582297 897 ntTSL 3 BASIC12.49□□□□□ -0.41
APOC4P55056 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 AL691403.2-201ENST00000618460 490 ntBASIC12.49□□□□□ -0.41
APOC4P55056 C20orf181-201ENST00000623918 480 ntBASIC12.49□□□□□ -0.41
APOC4P55056 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
APOC4P55056 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC12.49□□□□□ -0.41
APOC4P55056 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms