Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AC243591.1-201ENST00000452967 1364 ntBASIC18.27■□□□□ 0.51
RAD23BP54727 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.27■□□□□ 0.51
RAD23BP54727 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.27■□□□□ 0.51
RAD23BP54727 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
RAD23BP54727 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
RAD23BP54727 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
RAD23BP54727 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAD23BP54727 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAD23BP54727 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAD23BP54727 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.26■□□□□ 0.51
RAD23BP54727 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
RAD23BP54727 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.26■□□□□ 0.51
RAD23BP54727 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
RAD23BP54727 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.26■□□□□ 0.51
RAD23BP54727 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAD23BP54727 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAD23BP54727 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAD23BP54727 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAD23BP54727 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAD23BP54727 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.26■□□□□ 0.51
RAD23BP54727 AP002414.1-201ENST00000391405 1147 ntBASIC18.26■□□□□ 0.51
RAD23BP54727 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.26■□□□□ 0.51
RAD23BP54727 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.26■□□□□ 0.51
RAD23BP54727 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
RAD23BP54727 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.26■□□□□ 0.51
RAD23BP54727 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.26■□□□□ 0.51
RAD23BP54727 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.26■□□□□ 0.51
RAD23BP54727 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.26■□□□□ 0.51
RAD23BP54727 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RAD23BP54727 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
RAD23BP54727 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC18.26■□□□□ 0.51
RAD23BP54727 AC060834.1-201ENST00000443027 2032 ntBASIC18.26■□□□□ 0.51
RAD23BP54727 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
RAD23BP54727 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
RAD23BP54727 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
RAD23BP54727 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.26■□□□□ 0.51
RAD23BP54727 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.26■□□□□ 0.51
RAD23BP54727 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
RAD23BP54727 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
RAD23BP54727 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.25■□□□□ 0.51
RAD23BP54727 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RAD23BP54727 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.25■□□□□ 0.51
RAD23BP54727 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
RAD23BP54727 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.25■□□□□ 0.51
RAD23BP54727 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.25■□□□□ 0.51
RAD23BP54727 AC092910.1-201ENST00000482027 1129 ntBASIC18.25■□□□□ 0.51
RAD23BP54727 RPS15P9-201ENST00000494093 319 ntBASIC18.25■□□□□ 0.51
RAD23BP54727 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.25■□□□□ 0.51
RAD23BP54727 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RAD23BP54727 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.25■□□□□ 0.51
RAD23BP54727 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC18.25■□□□□ 0.51
RAD23BP54727 LITAF-211ENST00000572255 516 ntTSL 4 BASIC18.25■□□□□ 0.51
RAD23BP54727 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
RAD23BP54727 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.25■□□□□ 0.51
RAD23BP54727 TERC-201ENST00000602385 541 ntBASIC18.25■□□□□ 0.51
RAD23BP54727 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.25■□□□□ 0.51
RAD23BP54727 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.25■□□□□ 0.51
RAD23BP54727 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RAD23BP54727 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
RAD23BP54727 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
RAD23BP54727 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
RAD23BP54727 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.25■□□□□ 0.51
RAD23BP54727 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
RAD23BP54727 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC18.24■□□□□ 0.51
RAD23BP54727 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD23BP54727 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
RAD23BP54727 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD23BP54727 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.24■□□□□ 0.51
RAD23BP54727 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD23BP54727 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD23BP54727 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.24■□□□□ 0.51
RAD23BP54727 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
RAD23BP54727 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.24■□□□□ 0.51
RAD23BP54727 PAWRP1-201ENST00000451083 565 ntBASIC18.24■□□□□ 0.51
RAD23BP54727 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD23BP54727 AC124947.2-201ENST00000547118 1133 ntBASIC18.24■□□□□ 0.51
RAD23BP54727 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.24■□□□□ 0.51
RAD23BP54727 MIR1199-201ENST00000621445 119 ntBASIC18.24■□□□□ 0.51
RAD23BP54727 AC117500.6-201ENST00000624871 588 ntBASIC18.24■□□□□ 0.51
RAD23BP54727 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.24■□□□□ 0.51
RAD23BP54727 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
RAD23BP54727 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms