Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLTCL1P53675 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CLTCL1P53675 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC24.12■■□□□ 1.45
CLTCL1P53675 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
CLTCL1P53675 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
CLTCL1P53675 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.12■■□□□ 1.45
CLTCL1P53675 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CLTCL1P53675 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
CLTCL1P53675 CRB3P1-201ENST00000449338 276 ntBASIC24.12■■□□□ 1.45
CLTCL1P53675 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC24.12■■□□□ 1.45
CLTCL1P53675 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC24.12■■□□□ 1.45
CLTCL1P53675 OARD1-208ENST00000469104 704 ntTSL 2 BASIC24.12■■□□□ 1.45
CLTCL1P53675 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC24.12■■□□□ 1.45
CLTCL1P53675 AL138828.2-201ENST00000615812 383 ntBASIC24.12■■□□□ 1.45
CLTCL1P53675 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC24.12■■□□□ 1.45
CLTCL1P53675 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
CLTCL1P53675 AC092053.1-201ENST00000605787 1936 ntBASIC24.12■■□□□ 1.45
CLTCL1P53675 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC24.12■■□□□ 1.45
CLTCL1P53675 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC24.12■■□□□ 1.45
CLTCL1P53675 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLTCL1P53675 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC24.11■■□□□ 1.45
CLTCL1P53675 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLTCL1P53675 WBP2-203ENST00000433525 928 ntTSL 2 BASIC24.11■■□□□ 1.45
CLTCL1P53675 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC24.11■■□□□ 1.45
CLTCL1P53675 INGX-202ENST00000489074 768 ntBASIC24.11■■□□□ 1.45
CLTCL1P53675 SERBP1P5-201ENST00000510079 1181 ntBASIC24.11■■□□□ 1.45
CLTCL1P53675 AC013467.2-201ENST00000605472 835 ntBASIC24.11■■□□□ 1.45
CLTCL1P53675 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CLTCL1P53675 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CLTCL1P53675 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLTCL1P53675 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
CLTCL1P53675 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
CLTCL1P53675 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLTCL1P53675 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLTCL1P53675 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLTCL1P53675 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CLTCL1P53675 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CLTCL1P53675 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC24.1■■□□□ 1.45
CLTCL1P53675 TERF1P3-201ENST00000505638 1227 ntBASIC24.1■■□□□ 1.45
CLTCL1P53675 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC24.1■■□□□ 1.45
CLTCL1P53675 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLTCL1P53675 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC24.1■■□□□ 1.45
CLTCL1P53675 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CLTCL1P53675 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC24.1■■□□□ 1.45
CLTCL1P53675 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC24.1■■□□□ 1.45
CLTCL1P53675 TUBB8P12-201ENST00000308911 1335 ntBASIC24.1■■□□□ 1.45
CLTCL1P53675 TUBB7P-202ENST00000428444 1305 ntBASIC24.1■■□□□ 1.45
CLTCL1P53675 TUBB8P7-204ENST00000567960 1332 ntBASIC24.1■■□□□ 1.45
CLTCL1P53675 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC24.1■■□□□ 1.45
CLTCL1P53675 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLTCL1P53675 AC073439.1-201ENST00000624121 1774 ntBASIC24.1■■□□□ 1.45
CLTCL1P53675 PP12613-201ENST00000424958 2230 ntBASIC24.1■■□□□ 1.45
CLTCL1P53675 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLTCL1P53675 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CLTCL1P53675 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLTCL1P53675 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CLTCL1P53675 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC24.1■■□□□ 1.45
CLTCL1P53675 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CLTCL1P53675 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CLTCL1P53675 AL080243.2-201ENST00000418783 582 ntBASIC24.1■■□□□ 1.45
CLTCL1P53675 AC241585.1-201ENST00000433527 519 ntBASIC24.1■■□□□ 1.45
CLTCL1P53675 TAF8-206ENST00000472818 719 ntTSL 2 BASIC24.1■■□□□ 1.45
CLTCL1P53675 KRT18P34-201ENST00000488218 1270 ntBASIC24.1■■□□□ 1.45
CLTCL1P53675 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC24.1■■□□□ 1.45
CLTCL1P53675 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CLTCL1P53675 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 AL671710.1-201ENST00000610245 2349 ntBASIC24.09■■□□□ 1.45
CLTCL1P53675 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC24.09■■□□□ 1.45
CLTCL1P53675 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
CLTCL1P53675 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC24.09■■□□□ 1.45
CLTCL1P53675 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC24.09■■□□□ 1.45
CLTCL1P53675 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC24.09■■□□□ 1.45
CLTCL1P53675 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC24.09■■□□□ 1.45
CLTCL1P53675 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC24.09■■□□□ 1.45
CLTCL1P53675 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC24.09■■□□□ 1.45
CLTCL1P53675 AC004790.1-201ENST00000612686 536 ntBASIC24.09■■□□□ 1.45
CLTCL1P53675 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
CLTCL1P53675 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CLTCL1P53675 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC24.08■■□□□ 1.45
CLTCL1P53675 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC24.08■■□□□ 1.45
CLTCL1P53675 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC24.08■■□□□ 1.45
CLTCL1P53675 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC24.08■■□□□ 1.45
CLTCL1P53675 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CLTCL1P53675 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CLTCL1P53675 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms