Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 ELL2P1-201ENST00000413990 1906 ntBASIC18.81■□□□□ 0.6
GPC3P51654 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.81■□□□□ 0.6
GPC3P51654 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
GPC3P51654 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.81■□□□□ 0.6
GPC3P51654 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.81■□□□□ 0.6
GPC3P51654 AC107918.2-201ENST00000530817 355 ntBASIC18.81■□□□□ 0.6
GPC3P51654 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.81■□□□□ 0.6
GPC3P51654 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC18.81■□□□□ 0.6
GPC3P51654 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.81■□□□□ 0.6
GPC3P51654 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
GPC3P51654 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC3P51654 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC3P51654 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC3P51654 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.8■□□□□ 0.6
GPC3P51654 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
GPC3P51654 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC3P51654 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC3P51654 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.8■□□□□ 0.6
GPC3P51654 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
GPC3P51654 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.8■□□□□ 0.6
GPC3P51654 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC3P51654 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.8■□□□□ 0.6
GPC3P51654 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.8■□□□□ 0.6
GPC3P51654 AL513480.1-201ENST00000451731 511 ntBASIC18.8■□□□□ 0.6
GPC3P51654 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
GPC3P51654 CFL1-202ENST00000524553 860 ntTSL 2 BASIC18.8■□□□□ 0.6
GPC3P51654 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC18.8■□□□□ 0.6
GPC3P51654 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
GPC3P51654 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.8■□□□□ 0.6
GPC3P51654 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC3P51654 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC3P51654 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC3P51654 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
GPC3P51654 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC18.8■□□□□ 0.6
GPC3P51654 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
GPC3P51654 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.79■□□□□ 0.6
GPC3P51654 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
GPC3P51654 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
GPC3P51654 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 SLC25A1P3-201ENST00000395415 828 ntBASIC18.79■□□□□ 0.6
GPC3P51654 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.79■□□□□ 0.6
GPC3P51654 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.79■□□□□ 0.6
GPC3P51654 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 AL031432.2-201ENST00000566714 459 ntBASIC18.79■□□□□ 0.6
GPC3P51654 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.79■□□□□ 0.6
GPC3P51654 AL928711.1-201ENST00000570165 459 ntBASIC18.79■□□□□ 0.6
GPC3P51654 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
GPC3P51654 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
GPC3P51654 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.79■□□□□ 0.6
GPC3P51654 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
GPC3P51654 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
GPC3P51654 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC3P51654 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
GPC3P51654 AC020916.1-201ENST00000587762 1774 ntBASIC18.78■□□□□ 0.6
GPC3P51654 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC3P51654 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
GPC3P51654 AP001094.4-201ENST00000579008 2176 ntBASIC18.78■□□□□ 0.6
GPC3P51654 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 FAM58CP-201ENST00000435741 640 ntBASIC18.78■□□□□ 0.6
GPC3P51654 CEND1P1-201ENST00000451006 455 ntBASIC18.78■□□□□ 0.6
GPC3P51654 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.78■□□□□ 0.6
GPC3P51654 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.78■□□□□ 0.6
GPC3P51654 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
GPC3P51654 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.78■□□□□ 0.6
GPC3P51654 AC068137.2-201ENST00000605408 478 ntBASIC18.78■□□□□ 0.6
GPC3P51654 AL596442.2-201ENST00000610240 980 ntBASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms