Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BRCA2P51587 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
BRCA2P51587 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.85■□□□□ 0.61
BRCA2P51587 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
BRCA2P51587 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRCA2P51587 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRCA2P51587 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRCA2P51587 AC002558.1-201ENST00000488906 803 ntBASIC18.85■□□□□ 0.61
BRCA2P51587 RPSAP52-203ENST00000622976 1023 ntBASIC18.85■□□□□ 0.61
BRCA2P51587 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.85■□□□□ 0.61
BRCA2P51587 SLC7A15P-201ENST00000424028 1363 ntBASIC18.85■□□□□ 0.61
BRCA2P51587 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRCA2P51587 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRCA2P51587 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC18.85■□□□□ 0.61
BRCA2P51587 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
BRCA2P51587 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC18.85■□□□□ 0.61
BRCA2P51587 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.85■□□□□ 0.61
BRCA2P51587 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.85■□□□□ 0.61
BRCA2P51587 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.85■□□□□ 0.61
BRCA2P51587 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRCA2P51587 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.85■□□□□ 0.61
BRCA2P51587 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC18.85■□□□□ 0.61
BRCA2P51587 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCA2P51587 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
BRCA2P51587 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
BRCA2P51587 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCA2P51587 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRCA2P51587 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCA2P51587 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCA2P51587 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCA2P51587 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCA2P51587 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC18.84■□□□□ 0.61
BRCA2P51587 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.84■□□□□ 0.61
BRCA2P51587 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCA2P51587 PRR29-204ENST00000577953 565 ntTSL 4 BASIC18.84■□□□□ 0.61
BRCA2P51587 AC027307.2-201ENST00000591252 911 ntBASIC18.84■□□□□ 0.61
BRCA2P51587 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
BRCA2P51587 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCA2P51587 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.84■□□□□ 0.61
BRCA2P51587 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
BRCA2P51587 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRCA2P51587 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
BRCA2P51587 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.84■□□□□ 0.61
BRCA2P51587 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
BRCA2P51587 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRCA2P51587 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRCA2P51587 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRCA2P51587 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.83■□□□□ 0.61
BRCA2P51587 IGHV3-52-201ENST00000519770 353 ntBASIC18.83■□□□□ 0.61
BRCA2P51587 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC18.83■□□□□ 0.61
BRCA2P51587 AP005482.1-201ENST00000563722 1273 ntBASIC18.83■□□□□ 0.61
BRCA2P51587 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC18.83■□□□□ 0.61
BRCA2P51587 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.83■□□□□ 0.61
BRCA2P51587 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRCA2P51587 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
BRCA2P51587 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
BRCA2P51587 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
BRCA2P51587 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
BRCA2P51587 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BRCA2P51587 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
BRCA2P51587 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.83■□□□□ 0.6
BRCA2P51587 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRCA2P51587 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRCA2P51587 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.83■□□□□ 0.6
BRCA2P51587 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC18.83■□□□□ 0.6
BRCA2P51587 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.83■□□□□ 0.6
BRCA2P51587 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRCA2P51587 PFAS-212ENST00000625942 396 ntTSL 5 BASIC18.83■□□□□ 0.6
BRCA2P51587 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.83■□□□□ 0.6
BRCA2P51587 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRCA2P51587 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
BRCA2P51587 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.83■□□□□ 0.6
BRCA2P51587 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.83■□□□□ 0.6
BRCA2P51587 SPDYE19P-201ENST00000338590 713 ntBASIC18.83■□□□□ 0.6
BRCA2P51587 RPL37AP1-201ENST00000412502 279 ntBASIC18.83■□□□□ 0.6
BRCA2P51587 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.83■□□□□ 0.6
BRCA2P51587 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
BRCA2P51587 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
BRCA2P51587 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
BRCA2P51587 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
BRCA2P51587 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
BRCA2P51587 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.83■□□□□ 0.6
BRCA2P51587 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC18.83■□□□□ 0.6
BRCA2P51587 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.83■□□□□ 0.6
BRCA2P51587 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.82■□□□□ 0.6
BRCA2P51587 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.82■□□□□ 0.6
BRCA2P51587 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.82■□□□□ 0.6
BRCA2P51587 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.82■□□□□ 0.6
BRCA2P51587 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC18.82■□□□□ 0.6
BRCA2P51587 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.82■□□□□ 0.6
BRCA2P51587 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
BRCA2P51587 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms