Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CPT1AP50416 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.8■□□□□ 0.6
CPT1AP50416 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC18.8■□□□□ 0.6
CPT1AP50416 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.8■□□□□ 0.6
CPT1AP50416 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC18.8■□□□□ 0.6
CPT1AP50416 MPDU1-223ENST00000582151 728 ntBASIC18.8■□□□□ 0.6
CPT1AP50416 PRR29-209ENST00000582540 967 ntTSL 2 BASIC18.8■□□□□ 0.6
CPT1AP50416 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.8■□□□□ 0.6
CPT1AP50416 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.8■□□□□ 0.6
CPT1AP50416 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.8■□□□□ 0.6
CPT1AP50416 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC18.8■□□□□ 0.6
CPT1AP50416 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 AL021920.2-201ENST00000624828 1351 ntBASIC18.8■□□□□ 0.6
CPT1AP50416 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CPT1AP50416 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CPT1AP50416 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.79■□□□□ 0.6
CPT1AP50416 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CPT1AP50416 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.79■□□□□ 0.6
CPT1AP50416 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPT1AP50416 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPT1AP50416 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.79■□□□□ 0.6
CPT1AP50416 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.79■□□□□ 0.6
CPT1AP50416 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.79■□□□□ 0.6
CPT1AP50416 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CPT1AP50416 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPT1AP50416 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.79■□□□□ 0.6
CPT1AP50416 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC18.79■□□□□ 0.6
CPT1AP50416 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC18.79■□□□□ 0.6
CPT1AP50416 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CPT1AP50416 TERF1P3-201ENST00000505638 1227 ntBASIC18.79■□□□□ 0.6
CPT1AP50416 AC069120.2-201ENST00000524091 540 ntBASIC18.79■□□□□ 0.6
CPT1AP50416 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.79■□□□□ 0.6
CPT1AP50416 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CPT1AP50416 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPT1AP50416 AL390754.1-201ENST00000619088 582 ntBASIC18.79■□□□□ 0.6
CPT1AP50416 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CPT1AP50416 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.79■□□□□ 0.6
CPT1AP50416 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.79■□□□□ 0.6
CPT1AP50416 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CPT1AP50416 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.79■□□□□ 0.6
CPT1AP50416 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPT1AP50416 AC016027.1-202ENST00000607927 1699 ntBASIC18.79■□□□□ 0.6
CPT1AP50416 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CPT1AP50416 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CPT1AP50416 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPT1AP50416 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CPT1AP50416 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPT1AP50416 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CPT1AP50416 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPT1AP50416 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPT1AP50416 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPT1AP50416 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPT1AP50416 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.78■□□□□ 0.6
CPT1AP50416 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CPT1AP50416 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.78■□□□□ 0.6
CPT1AP50416 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.78■□□□□ 0.6
CPT1AP50416 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPT1AP50416 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.78■□□□□ 0.6
CPT1AP50416 TSPY16P-201ENST00000449843 468 ntBASIC18.78■□□□□ 0.6
CPT1AP50416 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.78■□□□□ 0.6
CPT1AP50416 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CPT1AP50416 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.78■□□□□ 0.6
CPT1AP50416 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC18.78■□□□□ 0.6
CPT1AP50416 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPT1AP50416 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPT1AP50416 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPT1AP50416 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CPT1AP50416 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPT1AP50416 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.78■□□□□ 0.6
CPT1AP50416 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC18.78■□□□□ 0.6
CPT1AP50416 HARS-204ENST00000438307 1789 ntTSL 2 BASIC18.78■□□□□ 0.6
CPT1AP50416 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
CPT1AP50416 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CPT1AP50416 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPT1AP50416 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPT1AP50416 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.77■□□□□ 0.6
CPT1AP50416 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPT1AP50416 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CPT1AP50416 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPT1AP50416 KRT8P49-201ENST00000604166 1432 ntBASIC18.77■□□□□ 0.6
CPT1AP50416 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPT1AP50416 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CPT1AP50416 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CPT1AP50416 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPT1AP50416 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPT1AP50416 AC236430.1-201ENST00000402231 743 ntBASIC18.77■□□□□ 0.6
CPT1AP50416 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
CPT1AP50416 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.77■□□□□ 0.6
CPT1AP50416 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.77■□□□□ 0.6
CPT1AP50416 AC002472.2-201ENST00000442739 958 ntBASIC18.77■□□□□ 0.6
CPT1AP50416 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CPT1AP50416 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CPT1AP50416 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.77■□□□□ 0.6
CPT1AP50416 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms