Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC19.21■□□□□ 0.67
TM4SF4P48230 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC19.21■□□□□ 0.67
TM4SF4P48230 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.21■□□□□ 0.67
TM4SF4P48230 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TM4SF4P48230 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
TM4SF4P48230 FOS-208ENST00000555686 1496 ntTSL 2 BASIC19.21■□□□□ 0.67
TM4SF4P48230 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.21■□□□□ 0.67
TM4SF4P48230 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TM4SF4P48230 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
TM4SF4P48230 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TM4SF4P48230 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF4P48230 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.2■□□□□ 0.66
TM4SF4P48230 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.2■□□□□ 0.66
TM4SF4P48230 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF4P48230 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
TM4SF4P48230 AC092933.1-201ENST00000393644 945 ntBASIC19.2■□□□□ 0.66
TM4SF4P48230 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC19.2■□□□□ 0.66
TM4SF4P48230 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.2■□□□□ 0.66
TM4SF4P48230 BNIP3P42-201ENST00000454982 569 ntBASIC19.2■□□□□ 0.66
TM4SF4P48230 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC19.2■□□□□ 0.66
TM4SF4P48230 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC19.2■□□□□ 0.66
TM4SF4P48230 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC19.2■□□□□ 0.66
TM4SF4P48230 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC19.2■□□□□ 0.66
TM4SF4P48230 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC19.2■□□□□ 0.66
TM4SF4P48230 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TM4SF4P48230 BNIP3P29-201ENST00000598302 571 ntBASIC19.2■□□□□ 0.66
TM4SF4P48230 AC011447.5-201ENST00000616168 564 ntBASIC19.2■□□□□ 0.66
TM4SF4P48230 MIR6869-201ENST00000619434 62 ntBASIC19.2■□□□□ 0.66
TM4SF4P48230 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF4P48230 AL109936.8-201ENST00000641772 604 ntBASIC19.2■□□□□ 0.66
TM4SF4P48230 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.2■□□□□ 0.66
TM4SF4P48230 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF4P48230 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.2■□□□□ 0.66
TM4SF4P48230 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF4P48230 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.2■□□□□ 0.66
TM4SF4P48230 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF4P48230 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF4P48230 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF4P48230 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF4P48230 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TM4SF4P48230 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.19■□□□□ 0.66
TM4SF4P48230 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF4P48230 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.19■□□□□ 0.66
TM4SF4P48230 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TM4SF4P48230 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF4P48230 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF4P48230 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF4P48230 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF4P48230 RBM39-205ENST00000397370 612 ntTSL 2 BASIC19.19■□□□□ 0.66
TM4SF4P48230 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TM4SF4P48230 AC004945.1-201ENST00000416738 983 ntBASIC19.19■□□□□ 0.66
TM4SF4P48230 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TM4SF4P48230 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF4P48230 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TM4SF4P48230 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF4P48230 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TM4SF4P48230 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC19.19■□□□□ 0.66
TM4SF4P48230 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC19.19■□□□□ 0.66
TM4SF4P48230 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF4P48230 GPR182-203ENST00000622922 591 ntBASIC19.19■□□□□ 0.66
TM4SF4P48230 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC19.19■□□□□ 0.66
TM4SF4P48230 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF4P48230 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF4P48230 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.19■□□□□ 0.66
TM4SF4P48230 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF4P48230 LINC00304-203ENST00000565008 1864 ntBASIC19.19■□□□□ 0.66
TM4SF4P48230 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.19■□□□□ 0.66
TM4SF4P48230 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.19■□□□□ 0.66
TM4SF4P48230 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
TM4SF4P48230 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TM4SF4P48230 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TM4SF4P48230 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.19■□□□□ 0.66
TM4SF4P48230 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.19■□□□□ 0.66
TM4SF4P48230 KRT8P44-201ENST00000441609 1350 ntBASIC19.19■□□□□ 0.66
TM4SF4P48230 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.18■□□□□ 0.66
TM4SF4P48230 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.18■□□□□ 0.66
TM4SF4P48230 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.18■□□□□ 0.66
TM4SF4P48230 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF4P48230 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.18■□□□□ 0.66
TM4SF4P48230 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC19.18■□□□□ 0.66
TM4SF4P48230 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF4P48230 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
TM4SF4P48230 BOLA2P3-201ENST00000404566 256 ntBASIC19.18■□□□□ 0.66
TM4SF4P48230 HAUS4P1-201ENST00000406739 1145 ntBASIC19.18■□□□□ 0.66
TM4SF4P48230 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF4P48230 TPRX2P-201ENST00000535362 881 ntBASIC19.18■□□□□ 0.66
TM4SF4P48230 AC123567.1-201ENST00000548294 1261 ntBASIC19.18■□□□□ 0.66
TM4SF4P48230 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF4P48230 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF4P48230 AC073439.1-201ENST00000624121 1774 ntBASIC19.18■□□□□ 0.66
TM4SF4P48230 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF4P48230 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TM4SF4P48230 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms