Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SLC6A12P48065 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.46■□□□□ 0.23
SLC6A12P48065 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC6A12P48065 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC6A12P48065 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.46■□□□□ 0.23
SLC6A12P48065 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
SLC6A12P48065 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC6A12P48065 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC6A12P48065 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SLC6A12P48065 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC6A12P48065 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.46■□□□□ 0.23
SLC6A12P48065 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SLC6A12P48065 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
SLC6A12P48065 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
SLC6A12P48065 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.46■□□□□ 0.22
SLC6A12P48065 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SLC6A12P48065 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.46■□□□□ 0.22
SLC6A12P48065 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC6A12P48065 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC6A12P48065 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC6A12P48065 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SLC6A12P48065 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC6A12P48065 KRT18P67-201ENST00000432816 1264 ntBASIC16.45■□□□□ 0.22
SLC6A12P48065 AC079781.3-201ENST00000449110 356 ntBASIC16.45■□□□□ 0.22
SLC6A12P48065 FAM197Y8-203ENST00000450145 560 ntBASIC16.45■□□□□ 0.22
SLC6A12P48065 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC6A12P48065 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC6A12P48065 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC6A12P48065 RN7SL510P-201ENST00000581311 263 ntBASIC16.45■□□□□ 0.22
SLC6A12P48065 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.45■□□□□ 0.22
SLC6A12P48065 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC6A12P48065 REXO1L3P-201ENST00000622202 1288 ntBASIC16.45■□□□□ 0.22
SLC6A12P48065 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 TOP3BP1-201ENST00000420768 1380 ntBASIC16.45■□□□□ 0.22
SLC6A12P48065 AC002310.6-201ENST00000624451 1377 ntBASIC16.45■□□□□ 0.22
SLC6A12P48065 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC6A12P48065 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 AL603756.1-201ENST00000606511 2163 ntBASIC16.45■□□□□ 0.22
SLC6A12P48065 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC6A12P48065 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 AL118508.1-201ENST00000613502 2345 ntBASIC16.45■□□□□ 0.22
SLC6A12P48065 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
SLC6A12P48065 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC6A12P48065 PI4KAP1-204ENST00000612579 1703 ntBASIC16.45■□□□□ 0.22
SLC6A12P48065 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.45■□□□□ 0.22
SLC6A12P48065 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SLC6A12P48065 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.45■□□□□ 0.22
SLC6A12P48065 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A12P48065 PCDHA14-201ENST00000506751 2298 ntBASIC16.44■□□□□ 0.22
SLC6A12P48065 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
SLC6A12P48065 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A12P48065 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SLC6A12P48065 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC6A12P48065 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A12P48065 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC6A12P48065 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A12P48065 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC6A12P48065 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A12P48065 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A12P48065 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
SLC6A12P48065 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A12P48065 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A12P48065 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A12P48065 AL450487.1-201ENST00000426799 995 ntBASIC16.44■□□□□ 0.22
SLC6A12P48065 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.44■□□□□ 0.22
SLC6A12P48065 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.44■□□□□ 0.22
SLC6A12P48065 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC6A12P48065 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.44■□□□□ 0.22
SLC6A12P48065 AC013467.2-201ENST00000605472 835 ntBASIC16.44■□□□□ 0.22
SLC6A12P48065 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.44■□□□□ 0.22
SLC6A12P48065 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A12P48065 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
SLC6A12P48065 AC008735.5-201ENST00000623544 497 ntBASIC16.44■□□□□ 0.22
SLC6A12P48065 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.44■□□□□ 0.22
SLC6A12P48065 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.44■□□□□ 0.22
SLC6A12P48065 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
SLC6A12P48065 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A12P48065 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SLC6A12P48065 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms