Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.98■□□□□ 0.31
HMGCLP35914 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 Z83851.2-201ENST00000609564 659 ntBASIC16.98■□□□□ 0.31
HMGCLP35914 AC010654.1-201ENST00000615722 808 ntBASIC16.98■□□□□ 0.31
HMGCLP35914 AC004790.2-201ENST00000623588 572 ntBASIC16.98■□□□□ 0.31
HMGCLP35914 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGCLP35914 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
HMGCLP35914 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.98■□□□□ 0.31
HMGCLP35914 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
HMGCLP35914 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.97■□□□□ 0.31
HMGCLP35914 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
HMGCLP35914 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
HMGCLP35914 AL590627.1-203ENST00000421194 1026 ntBASIC16.97■□□□□ 0.31
HMGCLP35914 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGCLP35914 OR7E47P-204ENST00000575924 449 ntBASIC16.97■□□□□ 0.31
HMGCLP35914 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.97■□□□□ 0.31
HMGCLP35914 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.97■□□□□ 0.31
HMGCLP35914 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 PCDHB17P-201ENST00000539533 2393 ntBASIC16.97■□□□□ 0.31
HMGCLP35914 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
HMGCLP35914 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC16.96■□□□□ 0.31
HMGCLP35914 AD000864.1-201ENST00000624076 2295 ntBASIC16.96■□□□□ 0.31
HMGCLP35914 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.96■□□□□ 0.31
HMGCLP35914 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC16.96■□□□□ 0.31
HMGCLP35914 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.96■□□□□ 0.31
HMGCLP35914 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HMGCLP35914 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.96■□□□□ 0.31
HMGCLP35914 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
HMGCLP35914 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.96■□□□□ 0.31
HMGCLP35914 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
HMGCLP35914 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.96■□□□□ 0.31
HMGCLP35914 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.96■□□□□ 0.31
HMGCLP35914 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.96■□□□□ 0.31
HMGCLP35914 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
HMGCLP35914 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.96■□□□□ 0.31
HMGCLP35914 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.96■□□□□ 0.31
HMGCLP35914 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
HMGCLP35914 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
HMGCLP35914 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HMGCLP35914 AC005915.1-201ENST00000624912 2018 ntBASIC16.96■□□□□ 0.3
HMGCLP35914 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HMGCLP35914 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
HMGCLP35914 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
HMGCLP35914 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HMGCLP35914 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
HMGCLP35914 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HMGCLP35914 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HMGCLP35914 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
HMGCLP35914 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.95■□□□□ 0.3
HMGCLP35914 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
HMGCLP35914 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
HMGCLP35914 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.95■□□□□ 0.3
HMGCLP35914 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
HMGCLP35914 RPL13AP23-201ENST00000480739 586 ntBASIC16.95■□□□□ 0.3
HMGCLP35914 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.95■□□□□ 0.3
HMGCLP35914 AP002490.2-201ENST00000524791 560 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms