Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SLC6A4P31645 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC6A4P31645 AC092068.3-201ENST00000587894 2016 ntBASIC17.47■□□□□ 0.39
SLC6A4P31645 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SLC6A4P31645 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC6A4P31645 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SLC6A4P31645 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.47■□□□□ 0.39
SLC6A4P31645 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC6A4P31645 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SLC6A4P31645 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SLC6A4P31645 AC124947.2-201ENST00000547118 1133 ntBASIC17.47■□□□□ 0.39
SLC6A4P31645 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.47■□□□□ 0.39
SLC6A4P31645 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.47■□□□□ 0.39
SLC6A4P31645 AL078644.1-201ENST00000609881 752 ntBASIC17.47■□□□□ 0.39
SLC6A4P31645 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.47■□□□□ 0.39
SLC6A4P31645 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC6A4P31645 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.47■□□□□ 0.39
SLC6A4P31645 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.47■□□□□ 0.39
SLC6A4P31645 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC6A4P31645 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SLC6A4P31645 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC6A4P31645 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A4P31645 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
SLC6A4P31645 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
SLC6A4P31645 SLC22A20-204ENST00000530038 1673 ntBASIC17.46■□□□□ 0.39
SLC6A4P31645 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC6A4P31645 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SLC6A4P31645 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A4P31645 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
SLC6A4P31645 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A4P31645 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
SLC6A4P31645 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A4P31645 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A4P31645 TOP3BP1-201ENST00000420768 1380 ntBASIC17.46■□□□□ 0.39
SLC6A4P31645 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A4P31645 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A4P31645 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A4P31645 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A4P31645 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC6A4P31645 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC6A4P31645 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC6A4P31645 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC17.46■□□□□ 0.39
SLC6A4P31645 DHDH-204ENST00000523250 634 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC6A4P31645 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A4P31645 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.46■□□□□ 0.39
SLC6A4P31645 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC6A4P31645 BCL2-203ENST00000589955 5011 ntBASIC17.46■□□□□ 0.39
SLC6A4P31645 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC6A4P31645 HTR7P1-202ENST00000624664 4411 ntBASIC17.46■□□□□ 0.39
SLC6A4P31645 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.46■□□□□ 0.39
SLC6A4P31645 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A4P31645 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A4P31645 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SLC6A4P31645 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.46■□□□□ 0.38
SLC6A4P31645 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SLC6A4P31645 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC6A4P31645 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC6A4P31645 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC6A4P31645 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SLC6A4P31645 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.45■□□□□ 0.38
SLC6A4P31645 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC17.45■□□□□ 0.38
SLC6A4P31645 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.45■□□□□ 0.38
SLC6A4P31645 MIR3687-2-201ENST00000577708 61 ntBASIC17.45■□□□□ 0.38
SLC6A4P31645 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.45■□□□□ 0.38
SLC6A4P31645 MIR3687-1-201ENST00000614492 61 ntBASIC17.45■□□□□ 0.38
SLC6A4P31645 C20orf181-201ENST00000623918 480 ntBASIC17.45■□□□□ 0.38
SLC6A4P31645 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SLC6A4P31645 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
SLC6A4P31645 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms