Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CTGFP29279 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19■□□□□ 0.63
CTGFP29279 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19■□□□□ 0.63
CTGFP29279 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19■□□□□ 0.63
CTGFP29279 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC19■□□□□ 0.63
CTGFP29279 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC19■□□□□ 0.63
CTGFP29279 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
CTGFP29279 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
CTGFP29279 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTGFP29279 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTGFP29279 EGFEM1P-202ENST00000431685 1563 ntBASIC18.99■□□□□ 0.63
CTGFP29279 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.99■□□□□ 0.63
CTGFP29279 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTGFP29279 FAM220BP-201ENST00000377689 816 ntBASIC18.99■□□□□ 0.63
CTGFP29279 SLC25A1P3-201ENST00000395415 828 ntBASIC18.99■□□□□ 0.63
CTGFP29279 KRT18P34-201ENST00000488218 1270 ntBASIC18.99■□□□□ 0.63
CTGFP29279 PRYP6-201ENST00000514804 343 ntBASIC18.99■□□□□ 0.63
CTGFP29279 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.99■□□□□ 0.63
CTGFP29279 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTGFP29279 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.99■□□□□ 0.63
CTGFP29279 AL079307.3-201ENST00000556114 283 ntBASIC18.99■□□□□ 0.63
CTGFP29279 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.99■□□□□ 0.63
CTGFP29279 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTGFP29279 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC18.99■□□□□ 0.63
CTGFP29279 AC021097.1-201ENST00000607902 574 ntBASIC18.99■□□□□ 0.63
CTGFP29279 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTGFP29279 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CTGFP29279 SNX12-206ENST00000622259 661 ntTSL 5 BASIC18.99■□□□□ 0.63
CTGFP29279 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTGFP29279 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTGFP29279 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CTGFP29279 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTGFP29279 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTGFP29279 AL023806.1-201ENST00000603994 1649 ntBASIC18.99■□□□□ 0.63
CTGFP29279 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.99■□□□□ 0.63
CTGFP29279 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CTGFP29279 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.99■□□□□ 0.63
CTGFP29279 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.99■□□□□ 0.63
CTGFP29279 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CTGFP29279 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.99■□□□□ 0.63
CTGFP29279 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CTGFP29279 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTGFP29279 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTGFP29279 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.98■□□□□ 0.63
CTGFP29279 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.98■□□□□ 0.63
CTGFP29279 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTGFP29279 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTGFP29279 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.98■□□□□ 0.63
CTGFP29279 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTGFP29279 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.98■□□□□ 0.63
CTGFP29279 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.98■□□□□ 0.63
CTGFP29279 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.98■□□□□ 0.63
CTGFP29279 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
CTGFP29279 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTGFP29279 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTGFP29279 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.98■□□□□ 0.63
CTGFP29279 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTGFP29279 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTGFP29279 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CTGFP29279 RN7SL837P-201ENST00000463010 287 ntBASIC18.98■□□□□ 0.63
CTGFP29279 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.98■□□□□ 0.63
CTGFP29279 ZNF890P-202ENST00000530367 1156 ntBASIC18.98■□□□□ 0.63
CTGFP29279 AL512361.1-201ENST00000554200 418 ntBASIC18.98■□□□□ 0.63
CTGFP29279 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.98■□□□□ 0.63
CTGFP29279 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.98■□□□□ 0.63
CTGFP29279 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTGFP29279 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTGFP29279 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CTGFP29279 AC120498.9-201ENST00000339021 3867 ntBASIC18.98■□□□□ 0.63
CTGFP29279 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
CTGFP29279 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTGFP29279 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.98■□□□□ 0.63
CTGFP29279 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CTGFP29279 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTGFP29279 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CTGFP29279 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTGFP29279 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.97■□□□□ 0.63
CTGFP29279 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTGFP29279 AL391825.1-201ENST00000457671 1364 ntBASIC18.97■□□□□ 0.63
CTGFP29279 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CTGFP29279 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.97■□□□□ 0.63
CTGFP29279 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTGFP29279 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.97■□□□□ 0.63
CTGFP29279 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTGFP29279 TMEM14DP-201ENST00000422205 345 ntBASIC18.97■□□□□ 0.63
CTGFP29279 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.97■□□□□ 0.63
CTGFP29279 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.97■□□□□ 0.63
CTGFP29279 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC18.97■□□□□ 0.63
CTGFP29279 DOC2GP-202ENST00000514950 1163 ntBASIC18.97■□□□□ 0.63
CTGFP29279 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.97■□□□□ 0.63
CTGFP29279 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTGFP29279 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms