Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CHMP24386 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.02■□□□□ 0.16
CHMP24386 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.02■□□□□ 0.16
CHMP24386 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.02■□□□□ 0.16
CHMP24386 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.02■□□□□ 0.16
CHMP24386 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP24386 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CHMP24386 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.02■□□□□ 0.15
CHMP24386 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP24386 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP24386 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CHMP24386 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.02■□□□□ 0.15
CHMP24386 DOC2GP-204ENST00000639052 2548 ntBASIC16.02■□□□□ 0.15
CHMP24386 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP24386 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CHMP24386 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP24386 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
CHMP24386 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.02■□□□□ 0.15
CHMP24386 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHMP24386 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.02■□□□□ 0.15
CHMP24386 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP24386 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP24386 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP24386 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CHMP24386 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.01■□□□□ 0.15
CHMP24386 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CHMP24386 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.01■□□□□ 0.15
CHMP24386 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
CHMP24386 COX5BP2-201ENST00000392354 334 ntBASIC16.01■□□□□ 0.15
CHMP24386 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 AC132008.2-207ENST00000454517 770 ntBASIC16.01■□□□□ 0.15
CHMP24386 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.01■□□□□ 0.15
CHMP24386 EMBP1-201ENST00000458200 901 ntBASIC16.01■□□□□ 0.15
CHMP24386 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.01■□□□□ 0.15
CHMP24386 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.01■□□□□ 0.15
CHMP24386 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.01■□□□□ 0.15
CHMP24386 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.01■□□□□ 0.15
CHMP24386 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.01■□□□□ 0.15
CHMP24386 LINC02012-201ENST00000608206 1725 ntBASIC16.01■□□□□ 0.15
CHMP24386 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CHMP24386 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
CHMP24386 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
CHMP24386 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 AC008894.3-201ENST00000624324 3103 ntBASIC16.01■□□□□ 0.15
CHMP24386 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHMP24386 AL513477.1-201ENST00000602865 2407 ntBASIC16■□□□□ 0.15
CHMP24386 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 AC010460.3-201ENST00000511359 1579 ntBASIC16■□□□□ 0.15
CHMP24386 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CHMP24386 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16■□□□□ 0.15
CHMP24386 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16■□□□□ 0.15
CHMP24386 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16■□□□□ 0.15
CHMP24386 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CHMP24386 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CHMP24386 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 AC103564.2-201ENST00000432853 1299 ntBASIC16■□□□□ 0.15
CHMP24386 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16■□□□□ 0.15
CHMP24386 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16■□□□□ 0.15
CHMP24386 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16■□□□□ 0.15
CHMP24386 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16■□□□□ 0.15
CHMP24386 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16■□□□□ 0.15
CHMP24386 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
CHMP24386 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms