Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC15.91■□□□□ 0.14
TNFRSF1BP20333 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TNFRSF1BP20333 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TNFRSF1BP20333 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC15.91■□□□□ 0.14
TNFRSF1BP20333 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TNFRSF1BP20333 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TNFRSF1BP20333 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 AL645728.1-201ENST00000366221 2101 ntBASIC15.9■□□□□ 0.14
TNFRSF1BP20333 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 KRT8P26-201ENST00000534154 1276 ntBASIC15.9■□□□□ 0.14
TNFRSF1BP20333 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 GPR89P-201ENST00000407924 1495 ntBASIC15.9■□□□□ 0.14
TNFRSF1BP20333 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TNFRSF1BP20333 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TNFRSF1BP20333 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
TNFRSF1BP20333 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 PCDHA1-201ENST00000378133 2726 ntBASIC15.89■□□□□ 0.13
TNFRSF1BP20333 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 HLA-A-202ENST00000376806 1854 ntBASIC15.89■□□□□ 0.13
TNFRSF1BP20333 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 RCN1P1-201ENST00000400413 996 ntBASIC15.89■□□□□ 0.13
TNFRSF1BP20333 KLF4P1-201ENST00000412782 1185 ntBASIC15.89■□□□□ 0.13
TNFRSF1BP20333 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 AL391005.1-201ENST00000623953 2435 ntBASIC15.89■□□□□ 0.13
TNFRSF1BP20333 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 AC026691.1-201ENST00000602502 2017 ntBASIC15.89■□□□□ 0.13
TNFRSF1BP20333 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
TNFRSF1BP20333 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC15.88■□□□□ 0.13
TNFRSF1BP20333 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms