Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RARBP10826 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
RARBP10826 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RARBP10826 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
RARBP10826 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.07■□□□□ 0.64
RARBP10826 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RARBP10826 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.07■□□□□ 0.64
RARBP10826 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.06■□□□□ 0.64
RARBP10826 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.06■□□□□ 0.64
RARBP10826 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.06■□□□□ 0.64
RARBP10826 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
RARBP10826 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC19.06■□□□□ 0.64
RARBP10826 AC109635.5-201ENST00000533593 962 ntBASIC19.06■□□□□ 0.64
RARBP10826 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
RARBP10826 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RARBP10826 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.06■□□□□ 0.64
RARBP10826 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RARBP10826 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RARBP10826 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.05■□□□□ 0.64
RARBP10826 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARBP10826 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARBP10826 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
RARBP10826 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARBP10826 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARBP10826 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARBP10826 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RARBP10826 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.05■□□□□ 0.64
RARBP10826 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.05■□□□□ 0.64
RARBP10826 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RARBP10826 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.05■□□□□ 0.64
RARBP10826 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARBP10826 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.05■□□□□ 0.64
RARBP10826 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.05■□□□□ 0.64
RARBP10826 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC19.05■□□□□ 0.64
RARBP10826 LINC02560-201ENST00000596379 459 ntBASIC19.05■□□□□ 0.64
RARBP10826 AL158211.3-201ENST00000607385 239 ntBASIC19.05■□□□□ 0.64
RARBP10826 AC008761.3-201ENST00000624803 892 ntBASIC19.05■□□□□ 0.64
RARBP10826 AC084121.4-201ENST00000641598 221 ntBASIC19.05■□□□□ 0.64
RARBP10826 AF228730.8-201ENST00000642140 221 ntBASIC19.05■□□□□ 0.64
RARBP10826 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARBP10826 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.05■□□□□ 0.64
RARBP10826 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.05■□□□□ 0.64
RARBP10826 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARBP10826 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARBP10826 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RARBP10826 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RARBP10826 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARBP10826 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARBP10826 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARBP10826 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARBP10826 AC020916.1-201ENST00000587762 1774 ntBASIC19.04■□□□□ 0.64
RARBP10826 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARBP10826 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.04■□□□□ 0.64
RARBP10826 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RARBP10826 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RARBP10826 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.04■□□□□ 0.64
RARBP10826 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.04■□□□□ 0.64
RARBP10826 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RARBP10826 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC19.04■□□□□ 0.64
RARBP10826 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.04■□□□□ 0.64
RARBP10826 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC19.04■□□□□ 0.64
RARBP10826 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARBP10826 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.04■□□□□ 0.64
RARBP10826 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.04■□□□□ 0.64
RARBP10826 MIR6080-201ENST00000617359 66 ntBASIC19.04■□□□□ 0.64
RARBP10826 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.04■□□□□ 0.64
RARBP10826 HFE2-206ENST00000634927 506 ntTSL 4 BASIC19.04■□□□□ 0.64
RARBP10826 AC138028.4-201ENST00000564984 1845 ntBASIC19.04■□□□□ 0.64
RARBP10826 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.04■□□□□ 0.64
RARBP10826 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RARBP10826 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RARBP10826 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RARBP10826 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.04■□□□□ 0.64
RARBP10826 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.03■□□□□ 0.64
RARBP10826 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.03■□□□□ 0.64
RARBP10826 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
RARBP10826 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RARBP10826 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RARBP10826 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
RARBP10826 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RARBP10826 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms