Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
SP9P0CG40 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SP9P0CG40 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.61■□□□□ 0.25
SP9P0CG40 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
SP9P0CG40 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SP9P0CG40 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SP9P0CG40 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SP9P0CG40 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SP9P0CG40 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SP9P0CG40 CROCCP3-202ENST00000420820 1947 ntBASIC16.61■□□□□ 0.25
SP9P0CG40 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.61■□□□□ 0.25
SP9P0CG40 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SP9P0CG40 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SP9P0CG40 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SP9P0CG40 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SP9P0CG40 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.61■□□□□ 0.25
SP9P0CG40 AC004945.1-201ENST00000416738 983 ntBASIC16.61■□□□□ 0.25
SP9P0CG40 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.61■□□□□ 0.25
SP9P0CG40 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.61■□□□□ 0.25
SP9P0CG40 ACTBP11-201ENST00000436287 1126 ntBASIC16.61■□□□□ 0.25
SP9P0CG40 BNIP3P42-201ENST00000454982 569 ntBASIC16.61■□□□□ 0.25
SP9P0CG40 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC16.61■□□□□ 0.25
SP9P0CG40 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SP9P0CG40 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.61■□□□□ 0.25
SP9P0CG40 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.61■□□□□ 0.25
SP9P0CG40 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.61■□□□□ 0.25
SP9P0CG40 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.61■□□□□ 0.25
SP9P0CG40 BNIP3P29-201ENST00000598302 571 ntBASIC16.61■□□□□ 0.25
SP9P0CG40 AC011447.5-201ENST00000616168 564 ntBASIC16.61■□□□□ 0.25
SP9P0CG40 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.61■□□□□ 0.25
SP9P0CG40 AL109936.8-201ENST00000641772 604 ntBASIC16.61■□□□□ 0.25
SP9P0CG40 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SP9P0CG40 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SP9P0CG40 AC120498.9-201ENST00000339021 3867 ntBASIC16.61■□□□□ 0.25
SP9P0CG40 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SP9P0CG40 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
SP9P0CG40 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SP9P0CG40 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SP9P0CG40 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SP9P0CG40 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.6■□□□□ 0.25
SP9P0CG40 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SP9P0CG40 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SP9P0CG40 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SP9P0CG40 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
SP9P0CG40 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SP9P0CG40 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.6■□□□□ 0.25
SP9P0CG40 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.6■□□□□ 0.25
SP9P0CG40 AC092933.1-201ENST00000393644 945 ntBASIC16.6■□□□□ 0.25
SP9P0CG40 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SP9P0CG40 BCYRN1-201ENST00000418539 200 ntBASIC16.6■□□□□ 0.25
SP9P0CG40 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.6■□□□□ 0.25
SP9P0CG40 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.6■□□□□ 0.25
SP9P0CG40 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC16.6■□□□□ 0.25
SP9P0CG40 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.6■□□□□ 0.25
SP9P0CG40 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.6■□□□□ 0.25
SP9P0CG40 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC16.6■□□□□ 0.25
SP9P0CG40 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.6■□□□□ 0.25
SP9P0CG40 AC044860.1-202ENST00000559481 777 ntBASIC16.6■□□□□ 0.25
SP9P0CG40 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.6■□□□□ 0.25
SP9P0CG40 CTBP2P3-201ENST00000585629 1255 ntBASIC16.6■□□□□ 0.25
SP9P0CG40 TMEM261P1-201ENST00000604899 340 ntBASIC16.6■□□□□ 0.25
SP9P0CG40 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SP9P0CG40 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SP9P0CG40 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SP9P0CG40 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SP9P0CG40 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SP9P0CG40 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SP9P0CG40 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.6■□□□□ 0.25
SP9P0CG40 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SP9P0CG40 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SP9P0CG40 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.6■□□□□ 0.25
SP9P0CG40 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.6■□□□□ 0.25
SP9P0CG40 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SP9P0CG40 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.59■□□□□ 0.25
SP9P0CG40 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.59■□□□□ 0.25
SP9P0CG40 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SP9P0CG40 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.59■□□□□ 0.25
SP9P0CG40 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SP9P0CG40 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SP9P0CG40 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.59■□□□□ 0.25
SP9P0CG40 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.59■□□□□ 0.25
SP9P0CG40 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SP9P0CG40 AC007389.4-201ENST00000454674 793 ntBASIC16.59■□□□□ 0.25
SP9P0CG40 ELK1P1-201ENST00000485699 580 ntBASIC16.59■□□□□ 0.25
SP9P0CG40 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SP9P0CG40 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.59■□□□□ 0.25
SP9P0CG40 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.59■□□□□ 0.25
SP9P0CG40 MPDU1-223ENST00000582151 728 ntBASIC16.59■□□□□ 0.25
SP9P0CG40 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.59■□□□□ 0.25
SP9P0CG40 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SP9P0CG40 LINC00896-202ENST00000609602 2128 ntBASIC16.59■□□□□ 0.25
SP9P0CG40 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SP9P0CG40 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SP9P0CG40 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
SP9P0CG40 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SP9P0CG40 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SP9P0CG40 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SP9P0CG40 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SP9P0CG40 LINC00895-201ENST00000629028 1637 ntBASIC16.59■□□□□ 0.25
SP9P0CG40 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms