Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC19.21■□□□□ 0.67
TPM3P06753 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC19.21■□□□□ 0.67
TPM3P06753 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TPM3P06753 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC19.21■□□□□ 0.67
TPM3P06753 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC19.21■□□□□ 0.66
TPM3P06753 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.2■□□□□ 0.66
TPM3P06753 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
TPM3P06753 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.2■□□□□ 0.66
TPM3P06753 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.2■□□□□ 0.66
TPM3P06753 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 RASA4DP-201ENST00000460726 1199 ntBASIC19.2■□□□□ 0.66
TPM3P06753 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.2■□□□□ 0.66
TPM3P06753 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.2■□□□□ 0.66
TPM3P06753 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.2■□□□□ 0.66
TPM3P06753 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC19.2■□□□□ 0.66
TPM3P06753 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TPM3P06753 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC19.2■□□□□ 0.66
TPM3P06753 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
TPM3P06753 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TPM3P06753 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.2■□□□□ 0.66
TPM3P06753 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC19.2■□□□□ 0.66
TPM3P06753 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TPM3P06753 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC19.2■□□□□ 0.66
TPM3P06753 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC19.2■□□□□ 0.66
TPM3P06753 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TPM3P06753 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
TPM3P06753 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.19■□□□□ 0.66
TPM3P06753 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TPM3P06753 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC19.19■□□□□ 0.66
TPM3P06753 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TPM3P06753 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC19.19■□□□□ 0.66
TPM3P06753 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.19■□□□□ 0.66
TPM3P06753 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
TPM3P06753 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.19■□□□□ 0.66
TPM3P06753 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.19■□□□□ 0.66
TPM3P06753 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.19■□□□□ 0.66
TPM3P06753 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC19.19■□□□□ 0.66
TPM3P06753 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC19.19■□□□□ 0.66
TPM3P06753 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 HYMAI-201ENST00000635591 3347 ntBASIC19.19■□□□□ 0.66
TPM3P06753 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TPM3P06753 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TPM3P06753 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TPM3P06753 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC19.19■□□□□ 0.66
TPM3P06753 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TPM3P06753 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.19■□□□□ 0.66
TPM3P06753 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TPM3P06753 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.18■□□□□ 0.66
TPM3P06753 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.18■□□□□ 0.66
TPM3P06753 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.18■□□□□ 0.66
TPM3P06753 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TPM3P06753 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 MMP23A-201ENST00000234610 1017 ntBASIC19.18■□□□□ 0.66
TPM3P06753 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TPM3P06753 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.18■□□□□ 0.66
TPM3P06753 FAM8A6P-201ENST00000407496 1135 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms