Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.58■□□□□ 0.08
P04436 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.58■□□□□ 0.08
P04436 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
P04436 AC092865.6-201ENST00000642101 219 ntBASIC15.58■□□□□ 0.08
P04436 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
P04436 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
P04436 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
P04436 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
P04436 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
P04436 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.58■□□□□ 0.08
P04436 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
P04436 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
P04436 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
P04436 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
P04436 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
P04436 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
P04436 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.58■□□□□ 0.08
P04436 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
P04436 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
P04436 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
P04436 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC15.57■□□□□ 0.08
P04436 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
P04436 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC15.57■□□□□ 0.08
P04436 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
P04436 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
P04436 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
P04436 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
P04436 CROCCP2-202ENST00000412962 2773 ntBASIC15.57■□□□□ 0.08
P04436 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
P04436 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
P04436 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
P04436 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
P04436 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
P04436 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.57■□□□□ 0.08
P04436 MCCD1P2-201ENST00000423228 335 ntBASIC15.57■□□□□ 0.08
P04436 GPX1P2-201ENST00000429271 606 ntBASIC15.57■□□□□ 0.08
P04436 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
P04436 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
P04436 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.57■□□□□ 0.08
P04436 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC15.57■□□□□ 0.08
P04436 KRT19P2-202ENST00000557173 1012 ntBASIC15.57■□□□□ 0.08
P04436 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.57■□□□□ 0.08
P04436 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC15.57■□□□□ 0.08
P04436 AC139530.3-201ENST00000620344 690 ntBASIC15.57■□□□□ 0.08
P04436 AL513190.1-201ENST00000621254 727 ntBASIC15.57■□□□□ 0.08
P04436 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
P04436 AC025580.3-201ENST00000617932 1424 ntBASIC15.57■□□□□ 0.08
P04436 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
P04436 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
P04436 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
P04436 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
P04436 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
P04436 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.57■□□□□ 0.08
P04436 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.57■□□□□ 0.08
P04436 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
P04436 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.57■□□□□ 0.08
P04436 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
P04436 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
P04436 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
P04436 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC15.56■□□□□ 0.08
P04436 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
P04436 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.56■□□□□ 0.08
P04436 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
P04436 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
P04436 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
P04436 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.56■□□□□ 0.08
P04436 RPSAP43-201ENST00000402237 625 ntBASIC15.56■□□□□ 0.08
P04436 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.56■□□□□ 0.08
P04436 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.56■□□□□ 0.08
P04436 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC15.56■□□□□ 0.08
P04436 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
P04436 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.56■□□□□ 0.08
P04436 PDPK2P-202ENST00000562415 1191 ntBASIC15.56■□□□□ 0.08
P04436 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
P04436 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
P04436 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.56■□□□□ 0.08
P04436 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.56■□□□□ 0.08
P04436 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.56■□□□□ 0.08
P04436 LINC00896-202ENST00000609602 2128 ntBASIC15.56■□□□□ 0.08
P04436 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
P04436 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
P04436 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
P04436 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
P04436 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
P04436 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.55■□□□□ 0.08
P04436 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
P04436 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
P04436 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
P04436 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
P04436 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.55■□□□□ 0.08
P04436 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.55■□□□□ 0.08
P04436 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
P04436 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
P04436 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.55■□□□□ 0.08
P04436 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
P04436 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
P04436 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.55■□□□□ 0.08
P04436 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.55■□□□□ 0.08
P04436 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
P04436 AC074386.1-202ENST00000463561 864 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms