Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.46■□□□□ 0.38
MT-ND3P03897 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
MT-ND3P03897 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 AC046158.3-201ENST00000624947 2558 ntBASIC17.45■□□□□ 0.38
MT-ND3P03897 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
MT-ND3P03897 NFIC-211ENST00000641145 8399 ntBASIC17.45■□□□□ 0.38
MT-ND3P03897 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MT-ND3P03897 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
MT-ND3P03897 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.45■□□□□ 0.38
MT-ND3P03897 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.45■□□□□ 0.38
MT-ND3P03897 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
MT-ND3P03897 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.45■□□□□ 0.38
MT-ND3P03897 AC008894.3-201ENST00000624324 3103 ntBASIC17.45■□□□□ 0.38
MT-ND3P03897 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.45■□□□□ 0.38
MT-ND3P03897 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.45■□□□□ 0.38
MT-ND3P03897 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.45■□□□□ 0.38
MT-ND3P03897 LINC00265-3P-201ENST00000447588 903 ntBASIC17.45■□□□□ 0.38
MT-ND3P03897 AC068472.1-201ENST00000474589 881 ntBASIC17.45■□□□□ 0.38
MT-ND3P03897 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.45■□□□□ 0.38
MT-ND3P03897 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.45■□□□□ 0.38
MT-ND3P03897 TPSP2-201ENST00000561760 610 ntBASIC17.45■□□□□ 0.38
MT-ND3P03897 AL390719.2-201ENST00000606993 987 ntBASIC17.45■□□□□ 0.38
MT-ND3P03897 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.45■□□□□ 0.38
MT-ND3P03897 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.45■□□□□ 0.38
MT-ND3P03897 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.45■□□□□ 0.38
MT-ND3P03897 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
MT-ND3P03897 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
MT-ND3P03897 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.45■□□□□ 0.38
MT-ND3P03897 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.45■□□□□ 0.38
MT-ND3P03897 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC17.45■□□□□ 0.38
MT-ND3P03897 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
MT-ND3P03897 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.45■□□□□ 0.38
MT-ND3P03897 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
MT-ND3P03897 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
MT-ND3P03897 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.44■□□□□ 0.38
MT-ND3P03897 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.44■□□□□ 0.38
MT-ND3P03897 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
MT-ND3P03897 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.44■□□□□ 0.38
MT-ND3P03897 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.44■□□□□ 0.38
MT-ND3P03897 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.44■□□□□ 0.38
MT-ND3P03897 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
MT-ND3P03897 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 GUSBP12-201ENST00000513727 720 ntBASIC17.44■□□□□ 0.38
MT-ND3P03897 AP000867.3-201ENST00000524675 377 ntBASIC17.44■□□□□ 0.38
MT-ND3P03897 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.44■□□□□ 0.38
MT-ND3P03897 RN7SL510P-201ENST00000581311 263 ntBASIC17.44■□□□□ 0.38
MT-ND3P03897 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC17.44■□□□□ 0.38
MT-ND3P03897 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
MT-ND3P03897 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.44■□□□□ 0.38
MT-ND3P03897 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 AC078925.2-201ENST00000624013 1973 ntBASIC17.44■□□□□ 0.38
MT-ND3P03897 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
MT-ND3P03897 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
MT-ND3P03897 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.44■□□□□ 0.38
MT-ND3P03897 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.44■□□□□ 0.38
MT-ND3P03897 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
MT-ND3P03897 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms