Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
KRT6AP02538 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
KRT6AP02538 THAP5-204ENST00000438865 868 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT6AP02538 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
KRT6AP02538 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.6■□□□□ 0.25
KRT6AP02538 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
KRT6AP02538 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6AP02538 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
KRT6AP02538 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6AP02538 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6AP02538 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT6AP02538 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
KRT6AP02538 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6AP02538 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6AP02538 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6AP02538 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT6AP02538 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
KRT6AP02538 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6AP02538 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.59■□□□□ 0.25
KRT6AP02538 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT6AP02538 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
KRT6AP02538 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.59■□□□□ 0.25
KRT6AP02538 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT6AP02538 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6AP02538 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.59■□□□□ 0.25
KRT6AP02538 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.59■□□□□ 0.25
KRT6AP02538 MIR3180-1-201ENST00000580374 94 ntBASIC16.59■□□□□ 0.25
KRT6AP02538 MIR3180-3-201ENST00000584616 94 ntBASIC16.59■□□□□ 0.25
KRT6AP02538 AC091076.1-201ENST00000610741 619 ntBASIC16.59■□□□□ 0.25
KRT6AP02538 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT6AP02538 AP000867.4-201ENST00000641616 219 ntBASIC16.59■□□□□ 0.25
KRT6AP02538 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT6AP02538 AL118508.1-201ENST00000613502 2345 ntBASIC16.59■□□□□ 0.25
KRT6AP02538 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
KRT6AP02538 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
KRT6AP02538 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT6AP02538 FRMD8P1-201ENST00000440433 1524 ntBASIC16.59■□□□□ 0.25
KRT6AP02538 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6AP02538 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT6AP02538 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6AP02538 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
KRT6AP02538 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.59■□□□□ 0.25
KRT6AP02538 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6AP02538 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6AP02538 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
KRT6AP02538 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
KRT6AP02538 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
KRT6AP02538 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT6AP02538 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT6AP02538 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT6AP02538 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
KRT6AP02538 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT6AP02538 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
KRT6AP02538 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
KRT6AP02538 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.25
KRT6AP02538 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
KRT6AP02538 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
KRT6AP02538 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
KRT6AP02538 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
KRT6AP02538 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.58■□□□□ 0.25
KRT6AP02538 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT6AP02538 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT6AP02538 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.58■□□□□ 0.24
KRT6AP02538 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT6AP02538 ACTG1P4-201ENST00000425123 1122 ntBASIC16.58■□□□□ 0.24
KRT6AP02538 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
KRT6AP02538 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.58■□□□□ 0.24
KRT6AP02538 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT6AP02538 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT6AP02538 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.58■□□□□ 0.24
KRT6AP02538 AL358472.4-201ENST00000633140 710 ntBASIC16.58■□□□□ 0.24
KRT6AP02538 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT6AP02538 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT6AP02538 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT6AP02538 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT6AP02538 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT6AP02538 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT6AP02538 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
KRT6AP02538 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.58■□□□□ 0.24
KRT6AP02538 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.58■□□□□ 0.24
KRT6AP02538 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT6AP02538 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
KRT6AP02538 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
KRT6AP02538 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT6AP02538 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT6AP02538 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
KRT6AP02538 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT6AP02538 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
KRT6AP02538 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KRT6AP02538 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
KRT6AP02538 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
KRT6AP02538 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
KRT6AP02538 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms