Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
HLA-AP01891 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-AP01891 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HLA-AP01891 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-AP01891 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.48□□□□□ -0.09
HLA-AP01891 AP003041.3-201ENST00000527151 707 ntBASIC14.48□□□□□ -0.09
HLA-AP01891 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 AC010947.1-201ENST00000623454 693 ntBASIC14.48□□□□□ -0.09
HLA-AP01891 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-AP01891 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC14.48□□□□□ -0.09
HLA-AP01891 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-AP01891 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-AP01891 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC14.48□□□□□ -0.09
HLA-AP01891 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
HLA-AP01891 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
HLA-AP01891 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-AP01891 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-AP01891 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-AP01891 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-AP01891 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.47□□□□□ -0.09
HLA-AP01891 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.47□□□□□ -0.09
HLA-AP01891 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-AP01891 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HLA-AP01891 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.47□□□□□ -0.09
HLA-AP01891 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HLA-AP01891 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.47□□□□□ -0.09
HLA-AP01891 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HLA-AP01891 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-AP01891 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-AP01891 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-AP01891 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-AP01891 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-AP01891 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-AP01891 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-AP01891 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-AP01891 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-AP01891 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-AP01891 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-AP01891 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-AP01891 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-AP01891 AC087499.1-201ENST00000418141 1075 ntBASIC14.46□□□□□ -0.09
HLA-AP01891 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-AP01891 SLC25A1P2-201ENST00000430693 912 ntBASIC14.46□□□□□ -0.09
HLA-AP01891 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-AP01891 CCR12P-201ENST00000446203 998 ntBASIC14.46□□□□□ -0.09
HLA-AP01891 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-AP01891 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-AP01891 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-AP01891 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.46□□□□□ -0.09
HLA-AP01891 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-AP01891 AL023803.3-201ENST00000615559 522 ntBASIC14.46□□□□□ -0.09
HLA-AP01891 AC116562.4-202ENST00000641738 218 ntBASIC14.46□□□□□ -0.09
HLA-AP01891 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-AP01891 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-AP01891 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.46□□□□□ -0.09
HLA-AP01891 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HLA-AP01891 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC14.46□□□□□ -0.09
HLA-AP01891 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HLA-AP01891 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HLA-AP01891 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms