Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
MT-CO1P00395 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
MT-CO1P00395 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-CO1P00395 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.52■□□□□ 0.4
MT-CO1P00395 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-CO1P00395 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MT-CO1P00395 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.52■□□□□ 0.4
MT-CO1P00395 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MT-CO1P00395 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
MT-CO1P00395 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-CO1P00395 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-CO1P00395 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
MT-CO1P00395 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.52■□□□□ 0.4
MT-CO1P00395 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-CO1P00395 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-CO1P00395 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-CO1P00395 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-CO1P00395 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.52■□□□□ 0.4
MT-CO1P00395 AP002414.1-201ENST00000391405 1147 ntBASIC17.52■□□□□ 0.4
MT-CO1P00395 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.52■□□□□ 0.4
MT-CO1P00395 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
MT-CO1P00395 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.52■□□□□ 0.4
MT-CO1P00395 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.52■□□□□ 0.4
MT-CO1P00395 AC027601.4-201ENST00000611259 610 ntBASIC17.52■□□□□ 0.4
MT-CO1P00395 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-CO1P00395 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.4
MT-CO1P00395 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
MT-CO1P00395 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
MT-CO1P00395 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.52■□□□□ 0.4
MT-CO1P00395 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.52■□□□□ 0.4
MT-CO1P00395 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.52■□□□□ 0.39
MT-CO1P00395 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
MT-CO1P00395 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
MT-CO1P00395 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
MT-CO1P00395 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MT-CO1P00395 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MT-CO1P00395 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MT-CO1P00395 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MT-CO1P00395 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
MT-CO1P00395 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
MT-CO1P00395 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.51■□□□□ 0.39
MT-CO1P00395 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.51■□□□□ 0.39
MT-CO1P00395 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
MT-CO1P00395 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.51■□□□□ 0.39
MT-CO1P00395 CROCCP2-202ENST00000412962 2773 ntBASIC17.51■□□□□ 0.39
MT-CO1P00395 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
MT-CO1P00395 MED15P5-201ENST00000423150 992 ntBASIC17.51■□□□□ 0.39
MT-CO1P00395 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.51■□□□□ 0.39
MT-CO1P00395 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.51■□□□□ 0.39
MT-CO1P00395 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.51■□□□□ 0.39
MT-CO1P00395 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.51■□□□□ 0.39
MT-CO1P00395 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 TERC-201ENST00000602385 541 ntBASIC17.51■□□□□ 0.39
MT-CO1P00395 PI4KAP1-204ENST00000612579 1703 ntBASIC17.51■□□□□ 0.39
MT-CO1P00395 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.51■□□□□ 0.39
MT-CO1P00395 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.51■□□□□ 0.39
MT-CO1P00395 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
MT-CO1P00395 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
MT-CO1P00395 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
MT-CO1P00395 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
MT-CO1P00395 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
MT-CO1P00395 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-CO1P00395 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MT-CO1P00395 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-CO1P00395 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
MT-CO1P00395 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MT-CO1P00395 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-CO1P00395 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MT-CO1P00395 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-CO1P00395 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.5■□□□□ 0.39
MT-CO1P00395 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
MT-CO1P00395 FABP5-202ENST00000396359 986 ntTSL 5 BASIC17.5■□□□□ 0.39
MT-CO1P00395 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
MT-CO1P00395 KRT18P2-201ENST00000447938 1258 ntBASIC17.5■□□□□ 0.39
MT-CO1P00395 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.5■□□□□ 0.39
MT-CO1P00395 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.5■□□□□ 0.39
MT-CO1P00395 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.5■□□□□ 0.39
MT-CO1P00395 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.5■□□□□ 0.39
MT-CO1P00395 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.5■□□□□ 0.39
MT-CO1P00395 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms