Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.53■□□□□ 0.4
TOP3BO95985 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOP3BO95985 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TOP3BO95985 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOP3BO95985 AC079328.2-201ENST00000561241 3354 ntBASIC17.53■□□□□ 0.4
TOP3BO95985 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
TOP3BO95985 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
TOP3BO95985 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOP3BO95985 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOP3BO95985 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOP3BO95985 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.53■□□□□ 0.4
TOP3BO95985 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOP3BO95985 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOP3BO95985 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOP3BO95985 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.53■□□□□ 0.4
TOP3BO95985 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC17.53■□□□□ 0.4
TOP3BO95985 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.53■□□□□ 0.4
TOP3BO95985 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.53■□□□□ 0.4
TOP3BO95985 AP006288.1-201ENST00000446065 395 ntBASIC17.53■□□□□ 0.4
TOP3BO95985 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.53■□□□□ 0.4
TOP3BO95985 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC17.53■□□□□ 0.4
TOP3BO95985 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.53■□□□□ 0.4
TOP3BO95985 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOP3BO95985 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC17.53■□□□□ 0.4
TOP3BO95985 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.53■□□□□ 0.4
TOP3BO95985 AC002347.1-201ENST00000569543 541 ntBASIC17.53■□□□□ 0.4
TOP3BO95985 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.53■□□□□ 0.4
TOP3BO95985 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.53■□□□□ 0.4
TOP3BO95985 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.53■□□□□ 0.4
TOP3BO95985 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.53■□□□□ 0.4
TOP3BO95985 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TOP3BO95985 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOP3BO95985 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
TOP3BO95985 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TOP3BO95985 FLJ38576-201ENST00000623820 2459 ntBASIC17.53■□□□□ 0.4
TOP3BO95985 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
TOP3BO95985 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TOP3BO95985 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TOP3BO95985 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.52■□□□□ 0.4
TOP3BO95985 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.52■□□□□ 0.4
TOP3BO95985 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.52■□□□□ 0.4
TOP3BO95985 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.52■□□□□ 0.4
TOP3BO95985 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC17.52■□□□□ 0.4
TOP3BO95985 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TOP3BO95985 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.52■□□□□ 0.4
TOP3BO95985 PCDHA14-201ENST00000506751 2298 ntBASIC17.52■□□□□ 0.4
TOP3BO95985 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TOP3BO95985 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
TOP3BO95985 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TOP3BO95985 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TOP3BO95985 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.52■□□□□ 0.39
TOP3BO95985 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TOP3BO95985 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TOP3BO95985 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TOP3BO95985 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.52■□□□□ 0.39
TOP3BO95985 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TOP3BO95985 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.51■□□□□ 0.39
TOP3BO95985 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 AP002414.3-201ENST00000589352 1468 ntBASIC17.51■□□□□ 0.39
TOP3BO95985 KRT89P-201ENST00000620027 1478 ntBASIC17.51■□□□□ 0.39
TOP3BO95985 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.51■□□□□ 0.39
TOP3BO95985 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
TOP3BO95985 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.51■□□□□ 0.39
TOP3BO95985 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 PON3-203ENST00000427422 894 ntTSL 3 BASIC17.51■□□□□ 0.39
TOP3BO95985 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.51■□□□□ 0.39
TOP3BO95985 HLA-J-203ENST00000494367 1087 ntBASIC17.51■□□□□ 0.39
TOP3BO95985 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.51■□□□□ 0.39
TOP3BO95985 AC112698.1-201ENST00000510299 916 ntBASIC17.51■□□□□ 0.39
TOP3BO95985 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TOP3BO95985 AC106028.4-201ENST00000614509 607 ntBASIC17.51■□□□□ 0.39
TOP3BO95985 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms