Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RTN3O95197 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN3O95197 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN3O95197 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.01■□□□□ 0.47
RTN3O95197 AC002347.1-201ENST00000569543 541 ntBASIC18.01■□□□□ 0.47
RTN3O95197 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.01■□□□□ 0.47
RTN3O95197 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.01■□□□□ 0.47
RTN3O95197 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN3O95197 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN3O95197 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN3O95197 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN3O95197 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN3O95197 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN3O95197 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RTN3O95197 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RTN3O95197 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN3O95197 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RTN3O95197 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.01■□□□□ 0.47
RTN3O95197 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN3O95197 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RTN3O95197 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RTN3O95197 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN3O95197 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTN3O95197 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN3O95197 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18■□□□□ 0.47
RTN3O95197 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN3O95197 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RTN3O95197 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTN3O95197 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTN3O95197 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
RTN3O95197 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC18■□□□□ 0.47
RTN3O95197 KRT18P2-201ENST00000447938 1258 ntBASIC18■□□□□ 0.47
RTN3O95197 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC18■□□□□ 0.47
RTN3O95197 OR7E47P-204ENST00000575924 449 ntBASIC18■□□□□ 0.47
RTN3O95197 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18■□□□□ 0.47
RTN3O95197 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC18■□□□□ 0.47
RTN3O95197 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
RTN3O95197 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTN3O95197 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18■□□□□ 0.47
RTN3O95197 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18■□□□□ 0.47
RTN3O95197 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18■□□□□ 0.47
RTN3O95197 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
RTN3O95197 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.99■□□□□ 0.47
RTN3O95197 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN3O95197 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN3O95197 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN3O95197 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN3O95197 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.99■□□□□ 0.47
RTN3O95197 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.99■□□□□ 0.47
RTN3O95197 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN3O95197 IGLL3P-201ENST00000412472 434 ntBASIC17.99■□□□□ 0.47
RTN3O95197 AC004832.2-201ENST00000426397 482 ntBASIC17.99■□□□□ 0.47
RTN3O95197 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN3O95197 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN3O95197 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN3O95197 AC096734.2-201ENST00000562054 433 ntBASIC17.99■□□□□ 0.47
RTN3O95197 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.99■□□□□ 0.47
RTN3O95197 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.99■□□□□ 0.47
RTN3O95197 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTN3O95197 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN3O95197 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.99■□□□□ 0.47
RTN3O95197 AC002310.6-201ENST00000624451 1377 ntBASIC17.99■□□□□ 0.47
RTN3O95197 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RTN3O95197 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN3O95197 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN3O95197 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTN3O95197 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RTN3O95197 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTN3O95197 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RTN3O95197 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN3O95197 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN3O95197 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN3O95197 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RTN3O95197 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RTN3O95197 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.98■□□□□ 0.47
RTN3O95197 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.98■□□□□ 0.47
RTN3O95197 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RTN3O95197 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.98■□□□□ 0.47
RTN3O95197 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RTN3O95197 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.98■□□□□ 0.47
RTN3O95197 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
RTN3O95197 DNAJB3-201ENST00000446806 729 ntBASIC17.98■□□□□ 0.47
RTN3O95197 AC087163.2-201ENST00000457299 853 ntBASIC17.98■□□□□ 0.47
RTN3O95197 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
RTN3O95197 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN3O95197 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC17.98■□□□□ 0.47
RTN3O95197 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.98■□□□□ 0.47
RTN3O95197 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.98■□□□□ 0.47
RTN3O95197 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms