Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LTN1O94822 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
LTN1O94822 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
LTN1O94822 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC22.33■■□□□ 1.17
LTN1O94822 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC22.33■■□□□ 1.17
LTN1O94822 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
LTN1O94822 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
LTN1O94822 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC22.33■■□□□ 1.16
LTN1O94822 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC22.33■■□□□ 1.16
LTN1O94822 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
LTN1O94822 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC22.33■■□□□ 1.16
LTN1O94822 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC22.33■■□□□ 1.16
LTN1O94822 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC22.32■■□□□ 1.16
LTN1O94822 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LTN1O94822 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
LTN1O94822 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC22.32■■□□□ 1.16
LTN1O94822 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LTN1O94822 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LTN1O94822 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
LTN1O94822 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC22.32■■□□□ 1.16
LTN1O94822 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LTN1O94822 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LTN1O94822 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LTN1O94822 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC22.32■■□□□ 1.16
LTN1O94822 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC22.32■■□□□ 1.16
LTN1O94822 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC22.32■■□□□ 1.16
LTN1O94822 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
LTN1O94822 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC22.32■■□□□ 1.16
LTN1O94822 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC22.32■■□□□ 1.16
LTN1O94822 COQ4-205ENST00000609948 956 ntTSL 2 BASIC22.32■■□□□ 1.16
LTN1O94822 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
LTN1O94822 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LTN1O94822 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LTN1O94822 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LTN1O94822 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
LTN1O94822 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC22.32■■□□□ 1.16
LTN1O94822 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LTN1O94822 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC22.31■■□□□ 1.16
LTN1O94822 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC22.31■■□□□ 1.16
LTN1O94822 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
LTN1O94822 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LTN1O94822 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LTN1O94822 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
LTN1O94822 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LTN1O94822 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LTN1O94822 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LTN1O94822 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC22.31■■□□□ 1.16
LTN1O94822 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC22.31■■□□□ 1.16
LTN1O94822 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC22.31■■□□□ 1.16
LTN1O94822 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC22.31■■□□□ 1.16
LTN1O94822 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC22.31■■□□□ 1.16
LTN1O94822 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC22.31■■□□□ 1.16
LTN1O94822 AC003101.2-201ENST00000612557 442 ntBASIC22.31■■□□□ 1.16
LTN1O94822 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
LTN1O94822 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC22.31■■□□□ 1.16
LTN1O94822 RHBDF1P1-201ENST00000427504 1941 ntBASIC22.31■■□□□ 1.16
LTN1O94822 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
LTN1O94822 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
LTN1O94822 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LTN1O94822 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC22.31■■□□□ 1.16
LTN1O94822 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LTN1O94822 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
LTN1O94822 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
LTN1O94822 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC22.31■■□□□ 1.16
LTN1O94822 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
LTN1O94822 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LTN1O94822 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LTN1O94822 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LTN1O94822 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
LTN1O94822 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
LTN1O94822 RNA5SP410-201ENST00000516285 106 ntBASIC22.3■■□□□ 1.16
LTN1O94822 MPI-209ENST00000564003 1195 ntTSL 2 BASIC22.3■■□□□ 1.16
LTN1O94822 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC22.3■■□□□ 1.16
LTN1O94822 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
LTN1O94822 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC22.3■■□□□ 1.16
LTN1O94822 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LTN1O94822 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC22.3■■□□□ 1.16
LTN1O94822 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
LTN1O94822 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
LTN1O94822 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
LTN1O94822 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
LTN1O94822 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
LTN1O94822 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LTN1O94822 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC22.3■■□□□ 1.16
LTN1O94822 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LTN1O94822 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
LTN1O94822 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LTN1O94822 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
LTN1O94822 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
LTN1O94822 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC22.3■■□□□ 1.16
LTN1O94822 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
LTN1O94822 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC22.3■■□□□ 1.16
LTN1O94822 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LTN1O94822 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC22.3■■□□□ 1.16
LTN1O94822 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC22.3■■□□□ 1.16
LTN1O94822 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC22.3■■□□□ 1.16
LTN1O94822 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC22.3■■□□□ 1.16
LTN1O94822 MPDU1-223ENST00000582151 728 ntBASIC22.3■■□□□ 1.16
LTN1O94822 AC008738.7-201ENST00000609744 511 ntBASIC22.3■■□□□ 1.16
LTN1O94822 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms