Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
UPK1BO75841 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.9□□□□□ -0.02
UPK1BO75841 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1BO75841 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.9□□□□□ -0.02
UPK1BO75841 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1BO75841 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 AC060766.5-201ENST00000590539 871 ntBASIC14.9□□□□□ -0.02
UPK1BO75841 AC008687.5-201ENST00000593746 558 ntBASIC14.9□□□□□ -0.02
UPK1BO75841 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.9□□□□□ -0.02
UPK1BO75841 GXYLT1P5-201ENST00000614548 1189 ntBASIC14.9□□□□□ -0.02
UPK1BO75841 AC011298.2-201ENST00000617989 482 ntBASIC14.9□□□□□ -0.02
UPK1BO75841 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC14.9□□□□□ -0.02
UPK1BO75841 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1BO75841 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 CICP24-201ENST00000605464 2705 ntBASIC14.9□□□□□ -0.02
UPK1BO75841 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
UPK1BO75841 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.9□□□□□ -0.02
UPK1BO75841 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1BO75841 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1BO75841 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.9□□□□□ -0.02
UPK1BO75841 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
UPK1BO75841 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
UPK1BO75841 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.89□□□□□ -0.03
UPK1BO75841 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
UPK1BO75841 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC14.89□□□□□ -0.03
UPK1BO75841 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 C8orf49-201ENST00000525043 1968 ntBASIC14.89□□□□□ -0.03
UPK1BO75841 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
UPK1BO75841 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
UPK1BO75841 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.89□□□□□ -0.03
UPK1BO75841 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC14.89□□□□□ -0.03
UPK1BO75841 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.89□□□□□ -0.03
UPK1BO75841 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC14.89□□□□□ -0.03
UPK1BO75841 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
UPK1BO75841 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 AC091874.3-201ENST00000512672 1195 ntBASIC14.89□□□□□ -0.03
UPK1BO75841 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.89□□□□□ -0.03
UPK1BO75841 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC14.89□□□□□ -0.03
UPK1BO75841 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC14.89□□□□□ -0.03
UPK1BO75841 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.89□□□□□ -0.03
UPK1BO75841 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC14.89□□□□□ -0.03
UPK1BO75841 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.89□□□□□ -0.03
UPK1BO75841 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
UPK1BO75841 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.89□□□□□ -0.03
UPK1BO75841 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
UPK1BO75841 EGFEM1P-202ENST00000431685 1563 ntBASIC14.89□□□□□ -0.03
UPK1BO75841 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
UPK1BO75841 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
UPK1BO75841 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.89□□□□□ -0.03
UPK1BO75841 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
UPK1BO75841 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
UPK1BO75841 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC14.88□□□□□ -0.03
UPK1BO75841 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 AC006486.2-201ENST00000624246 2199 ntBASIC14.88□□□□□ -0.03
UPK1BO75841 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.88□□□□□ -0.03
UPK1BO75841 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
UPK1BO75841 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
UPK1BO75841 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms