Protein–RNA interactions for Protein: O75508

CLDN11, Claudin-11, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11O75508 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN11O75508 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.41■□□□□ 0.38
CLDN11O75508 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN11O75508 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN11O75508 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.41■□□□□ 0.38
CLDN11O75508 TUBB8P12-201ENST00000308911 1335 ntBASIC17.41■□□□□ 0.38
CLDN11O75508 TUBB7P-202ENST00000428444 1305 ntBASIC17.41■□□□□ 0.38
CLDN11O75508 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC17.41■□□□□ 0.38
CLDN11O75508 BCAR1-209ENST00000546196 1340 ntBASIC17.41■□□□□ 0.38
CLDN11O75508 TUBB8P7-204ENST00000567960 1332 ntBASIC17.41■□□□□ 0.38
CLDN11O75508 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
CLDN11O75508 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CLDN11O75508 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN11O75508 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN11O75508 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN11O75508 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN11O75508 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLDN11O75508 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CLDN11O75508 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.4■□□□□ 0.38
CLDN11O75508 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN11O75508 AC023274.1-201ENST00000418278 595 ntBASIC17.4■□□□□ 0.38
CLDN11O75508 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN11O75508 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN11O75508 KRT19P2-202ENST00000557173 1012 ntBASIC17.4■□□□□ 0.38
CLDN11O75508 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CLDN11O75508 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.4■□□□□ 0.38
CLDN11O75508 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.4■□□□□ 0.38
CLDN11O75508 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.4■□□□□ 0.38
CLDN11O75508 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.4■□□□□ 0.38
CLDN11O75508 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CLDN11O75508 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLDN11O75508 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CLDN11O75508 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLDN11O75508 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
CLDN11O75508 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CLDN11O75508 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CLDN11O75508 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN11O75508 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 PKD1P1-201ENST00000458669 6805 ntBASIC17.39■□□□□ 0.37
CLDN11O75508 AL353732.1-201ENST00000569618 1459 ntBASIC17.39■□□□□ 0.37
CLDN11O75508 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN11O75508 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 BX842568.4-201ENST00000421222 227 ntBASIC17.39■□□□□ 0.37
CLDN11O75508 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN11O75508 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC17.39■□□□□ 0.37
CLDN11O75508 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
CLDN11O75508 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CLDN11O75508 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN11O75508 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.39■□□□□ 0.37
CLDN11O75508 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CLDN11O75508 PDPK2P-202ENST00000562415 1191 ntBASIC17.39■□□□□ 0.37
CLDN11O75508 AC091167.2-201ENST00000579581 588 ntBASIC17.39■□□□□ 0.37
CLDN11O75508 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN11O75508 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN11O75508 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CLDN11O75508 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN11O75508 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.39■□□□□ 0.37
CLDN11O75508 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CLDN11O75508 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN11O75508 AC025580.3-201ENST00000617932 1424 ntBASIC17.38■□□□□ 0.37
CLDN11O75508 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN11O75508 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLDN11O75508 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN11O75508 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN11O75508 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN11O75508 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN11O75508 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN11O75508 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN11O75508 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms